prot_Ecto-sp13_S_contig9399.20996.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9399.20996.1
Unique Nameprot_Ecto-sp13_S_contig9399.20996.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length449
Homology
BLAST of mRNA_Ecto-sp13_S_contig9399.20996.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 704 bits (1817), Expect = 2.890e-250
Identity = 377/445 (84.72%), Postives = 386/445 (86.74%), Query Frame = 0
Query:    5 SDKTSDANREIRRRKTMELMSQGGLHLKDILADPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKIPFEHFQGGLRTLGLTIPEEDECEIFKTFDTDRSGTIELSEFIRWCLDIDTMAWKAERVRRTTVGGTSGGHGNRGDGEIGIDEAAARMAGEVAQAQLPPQQPRYPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEEARAKLFDKARGSVLSDYLLARLKLIDGRDADGSVTDTQASAAAISAAARLGLGGVGPGTAPESASIVLTSETTAESVEPPGEVSLPVTKSGSIFPRGTPTPVVVKLPEDDGGESGSFLLEDELVFSGLHTFSKHVSYKDFERVENEVSEGLKDGHERIENAERAQRRAHGSLENPHHRTSAF 449
            S+ TS   RE   RKTMELMSQGGLHLKDIL DPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLET                                  FDTD SGTIELSEFIRWCLDIDTMAWKAERVRRTT G TSGGHG RGDGEIGIDEAAARMAGEVAQAQLPP+QPR+PLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQ LPE+ARAKLFDKAR SVLSDYLLARLKLIDGRDADG+ TDTQASAAAISAAARLGLGGVGPGTAPESAS     ET AE VEPPGEVSLPVTKS SIFP GTPTPVVVKLPEDDGGESGSFLLEDELVFS LHTFSKHVSYKDF+RVENEVSEGLKDGH+RIENA++AQRRAHGSLENPHHRTSAF
Sbjct:   69 SNSTSRKVREAPARKTMELMSQGGLHLKDILGDPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLET----------------------------------FDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYLLARLKLIDGRDADGNATDTQASAAAISAAARLGLGGVGPGTAPESASTARAPETPAEPVEPPGEVSLPVTKSDSIFPIGTPTPVVVKLPEDDGGESGSFLLEDELVFSELHTFSKHVSYKDFKRVENEVSEGLKDGHDRIENADKAQRRAHGSLENPHHRTSAF 479          
BLAST of mRNA_Ecto-sp13_S_contig9399.20996.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 4.860e-25
Identity = 76/266 (28.57%), Postives = 134/266 (50.38%), Query Frame = 0
Query:   37 DPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKIPFEHFQGGLRTLGLTIPEEDECEI---FKTFDTDRSGTIELSEFIRWCLDIDTMAWKAERVRRTTVGGTSGGHGNRGDGEIGIDEAAARMAGEVAQAQLPPQQPRYPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEEARAKLFDKARGSVLSDYLLARLKLIDGRDADG 299
            + + D +PVE ++ ++ + KE G +  +LF  F   G  E  +    F+  LR LG    + DE E+      FDTD +GT+EL EF+ +CL I ++ W+AE+ RR           N  + +  ++ AA ++A   +  +        P+G L+++GS+ FWR+ E++ +A+H N ++  + IST        +P + VD   I V+  +AV    A       G+ +S+ ++ R +  DKA  ++  +YL  R +   G +  G
Sbjct:  103 EAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGG--EASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRL----------NNAESKDELNVAARKIARRRSSLRA------VPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAV------GQFESMSKDERREATDKAMTALRVEYLQHRWRKSGGYNFHG 344          
BLAST of mRNA_Ecto-sp13_S_contig9399.20996.1 vs. uniprot
Match: A0A7S2BJX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJX7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.320e-22
Identity = 83/287 (28.92%), Postives = 129/287 (44.95%), Query Frame = 0
Query:   37 DPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLETGSTEEKIPFEHFQGGLRTLG----LTIPEEDECEIFKTFDTDRSGTIELSEFIRWCLDIDTMAWKAERVRRTTVGGTSGGHGNRGDGEIGIDEAAARMAGEVAQAQLPP-----------QQPRYPLGT----------LIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEI--------QSLPEEARAKLFDKARGSVLSDYLLARLK 290
            D  +D T ++ M ++M + KE G +  Q+F  F  +    E  P + FQ GL  LG     TI E++  EIF+  D D  GTI++ EF   C +I  +AWKAE++R       S            I++AA     E     L P           +  R+   +          +IYEG+KLFWRT E + I MHE    HCI + +      E  P + ++  +I    +D   E + E   A + E         + L ++  A++ +  R  +LS+Y+L RL+
Sbjct:   13 DFKDDDTGIKKMWTVMTKAKESGMSVDQIFTFFKSSSGGSEIGPLD-FQEGLAALGPAITKTITEDELSEIFQDLDDDGGGTIDVDEFKAHCYNIPRLAWKAEKIRFEREKTKS------------IEDAAKMAEREATNLPLTPSGSTGAIMHALEDHRHQKDSAAAANMQSKEVIYEGTKLFWRTHEKIDIVMHEYSALHCIVMCSYNATTDEAHPNIIINKTMIEDTIED---EAVQEQLSAQRQEYCLRKQIVGRKLTDDEEAEVEESVRRGILSNYILLRLQ 283          
BLAST of mRNA_Ecto-sp13_S_contig9399.20996.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.370e-21
Identity = 69/221 (31.22%), Postives = 110/221 (49.77%), Query Frame = 0
Query:   84 FQGGLRTLGLTIPEEDECEIFKTFDTDRSGTIELSEFIRWCLDIDTMAWKAERVRRTTVGGTSGGHGNRGDGEIGIDEAAARMAGEVAQA----------QLPPQQPRYPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEEARAKLFDKARGSVLSDYLLARLKLIDG 294
            FQ GL TLG  I  E+  ++F   D +  G+I+L+EF R+CL+I +M WKAER RR  +G  +G      DG+  +++AA  MA E   A          +L   +P   LG + Y G K FWRT + + + +  N+ K  +AI      E+E    LK      +              ++A+K +     +E +A L +KA  + ++DY++ R+ + DG
Sbjct:  302 FQHGLATLGFNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGE-----DGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAIPASAAAEAEILNDLKAKRLAAKTEHAMGGSGSRGGESDANKEQAGDQQQEDQA-LSEKAHMAYIADYIVHRITMPDG 516          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9399.20996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCP2_ECTSI2.890e-25084.72EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSJ9_ECTSI4.860e-2528.57EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2BJX7_9STRA2.320e-2228.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D7G5R3_ECTSI1.370e-2131.22EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 66..139
e-value: 4.1E-8
score: 34.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 108..120
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 95..130
score: 10.971
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 65..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9399contigEcto-sp13_S_contig9399:1..5683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9399.20996.1mRNA_Ecto-sp13_S_contig9399.20996.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9399 1..5683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9399.20996.1 ID=prot_Ecto-sp13_S_contig9399.20996.1|Name=mRNA_Ecto-sp13_S_contig9399.20996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=449bp
ETERSDKTSDANREIRRRKTMELMSQGGLHLKDILADPSNDSTPVEAMRS
IMVRGKEHGWTTSQLFGVFLETGSTEEKIPFEHFQGGLRTLGLTIPEEDE
CEIFKTFDTDRSGTIELSEFIRWCLDIDTMAWKAERVRRTTVGGTSGGHG
NRGDGEIGIDEAAARMAGEVAQAQLPPQQPRYPLGTLIYEGSKLFWRTGE
SLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERI
AEMTEADKGEIQSLPEEARAKLFDKARGSVLSDYLLARLKLIDGRDADGS
VTDTQASAAAISAAARLGLGGVGPGTAPESASIVLTSETTAESVEPPGEV
SLPVTKSGSIFPRGTPTPVVVKLPEDDGGESGSFLLEDELVFSGLHTFSK
HVSYKDFERVENEVSEGLKDGHERIENAERAQRRAHGSLENPHHRTSAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair