prot_Ecto-sp13_S_contig9397.20995.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9397.20995.1
Unique Nameprot_Ecto-sp13_S_contig9397.20995.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9397.20995.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 7.680e-47
Identity = 133/161 (82.61%), Postives = 140/161 (86.96%), Query Frame = 0 
Query:    1 AQLPSGEVDASLDVKKPRKGLLGAVGGLFKTSKAKIEVPDADVDXXXXXXXXXXXXXXAELPKVDGVSADLPAVEGGLKAPDLPNASGDVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAEAPSVDLAGKVPSAEGGVGGELPSGDVSVT 161
            A+LPSGEVDASLDVKKP+KGLLGAVGGLFKTSKAKIEVPDADVD              A+LP VD VSADLPAVEGGLKAPD+PN SGDVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GSAEAPSVDLAGK+PS +GGV G+LPSGDVSVT
Sbjct:  859 AELPSGEVDASLDVKKPKKGLLGAVGGLFKTSKAKIEVPDADVDVSAPSLDVNVPSGGAKLPGVDDVSADLPAVEGGLKAPDMPNVSGDVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGSAEAPSVDLAGKMPSVQGGVAGKLPSGDVSVT 1019
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BLAST of mRNA_Ecto-sp13_S_contig9397.20995.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 5.050e-8
Identity = 61/103 (59.22%), Postives = 65/103 (63.11%), Query Frame = 0 
Query:   59 AELPKVDGVSADLPAVEGGLKAPDLPNASGDVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAEAPSVDLAGKVPSAEGGVGGELPSGDVSVT 161
            AELP V GVSADLP  EGGLK PD+P+       XXXXXXXXXXXXXXXXXX                        SVDLAGK+ S EGGVGGELPSGDVS+T
Sbjct:  999 AELPGVGGVSADLPTAEGGLKGPDMPDXXXXXXXXXXXXXXXXXXXXXXXXX------------------------SVDLAGKMHSVEGGVGGELPSGDVSMT 1077
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9397.20995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9M1_9PHAE7.680e-4782.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB94_ECTSI5.050e-859.22Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9397contigEcto-sp13_S_contig9397:2026..4017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9397.20995.1mRNA_Ecto-sp13_S_contig9397.20995.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9397 2024..4017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9397.20995.1 ID=prot_Ecto-sp13_S_contig9397.20995.1|Name=mRNA_Ecto-sp13_S_contig9397.20995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
AQLPSGEVDASLDVKKPRKGLLGAVGGLFKTSKAKIEVPDADVDVSAPSL
DVNVPSGEAELPKVDGVSADLPAVEGGLKAPDLPNASGDVSVPGVSADVS
VPDVSGSLKVPDVSGDVSLPSVDMDVPLGSAEAPSVDLAGKVPSAEGGVG
GELPSGDVSVT
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