prot_Ecto-sp13_S_contig9393.20990.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9393.20990.1
Unique Nameprot_Ecto-sp13_S_contig9393.20990.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9393.20990.1 vs. uniprot
Match: D8LKR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR8_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 9.580e-29
Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0 
Query:    1 MARDKSAWIHTDIQARGLRGRWEASRGYDGGWASSTVPSRPGLARQGSVAVVGQ 54
            MA DKSAWIH+ IQARGLRGRWEASRGYDGGWASST PSRPGLARQGSVAVVGQ
Sbjct:    1 MAPDKSAWIHSVIQARGLRGRWEASRGYDGGWASSTAPSRPGLARQGSVAVVGQ 54
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9393.20990.1 vs. uniprot
Match: D8LG34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG34_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 3.650e-10
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:    1 MARDKSAWIHTDIQARGLRGRWEASRGYDGG 31
            MA DK AWIH+ IQARGLRGRWEA RGYDGG
Sbjct:    1 MAPDKFAWIHSVIQARGLRGRWEACRGYDGG 31
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9393.20990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKR8_ECTSI9.580e-2992.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG34_ECTSI3.650e-1083.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9393contigEcto-sp13_S_contig9393:2085..2547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9393.20990.1mRNA_Ecto-sp13_S_contig9393.20990.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9393 2053..2614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9393.20990.1 ID=prot_Ecto-sp13_S_contig9393.20990.1|Name=mRNA_Ecto-sp13_S_contig9393.20990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
MARDKSAWIHTDIQARGLRGRWEASRGYDGGWASSTVPSRPGLARQGSVA
VVGQ*
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