prot_Ecto-sp13_S_contig9391.20988.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9391.20988.1
Unique Nameprot_Ecto-sp13_S_contig9391.20988.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length596
Homology
BLAST of mRNA_Ecto-sp13_S_contig9391.20988.1 vs. uniprot
Match: A0A6H5K008_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K008_9PHAE)

HSP 1 Score: 890 bits (2299), Expect = 5.370e-316
Identity = 513/595 (86.22%), Postives = 528/595 (88.74%), Query Frame = 0
Query:    1 STAASVAWSLRNPDDGKSVAPPAPHQQQEGKAGDVRGRFSRATVLALASLVLARRLARAGGPCLPPRVQATMGLGDDDALLLVSEGLRLARRAFETELCDDSQRQQHPPSAAAAEEGLRGRDLLGGEVLLERKVGGPAASHPSGTTVARSLLEWLTDSEDGRDAPEFAQGLPLSAATVSSSCSPRGKSPSPSGGSVDHDRAPSTGSVTASDSATRHSKRAHSSAYHDARGGRGVSGEEGGPAARKRQRLGSLPGGANGWDSGSASPCSRAADRGCAAPAEERAGSSTEEYASAADAFPSPPPSTEXXXXXRTPSQDAMYSDGATPRSPPSFSAGGASFVSGDTTLSSDRRPRGWGRVLFSAQSSDKMSEATQSPPRTRGPPTALSASSPEERNARWEVLADRVLEALDDRHGGVVGGSSAGADGSCGGLLTPEGEGNGSSSSGFAAEVAPILPDRCPLPRALAGDTVRSSPPGSRPFSPITPPAPPPVFHDLGAHGTPGEQGEEALTSSRVSSTADRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGVRAQGLGVVAAGCTTLMSAVALAFRAAPSSTAAEADADAQEDWWW 595
            STAA+VAWSLRNPDDG+SVAPPAPHQQQ+GKAGDVRGRFSRATVLALASLVLARRLARAGGPCLPPRVQATMGLGD DALLLVSEGLRLARRAFETELCDDSQ QQH  +AAAAE GLR +D LGGEVLLE+KV GPAASHPSGTT+ARSLLEWLTDSEDGRDAPEFAQG+PLSAATVSSSCSPR KSPSPSG SVDHDRAPS G VTASD ATR  KRA SSAYHD RGG GVSGEEGGP ARK QRLGS PGG NG DSGSASP SRAAD  CAAPAE+RAGSSTEEYASAADAFPS PPSTE     RTPSQDAMYSDGATPRSPPSFSAGGAS +SGDTTLS  RRPRGWGRVLFSAQSSDKMSEATQSPPRTRGPP ALSASSPEERNARWEVLADR+LEALD+RHGGVVGG SAGADG CGGL TPEGEGN SSSSGFAA VAPILPDRCPLPRALAGDTV+SSPPG  PFSPI      PVFHDLG HG P EQGEEALTSSRVSS     G XXXXXXXXX      XXXXXXXXXXXXGRGVRAQGLGVVAAGCTTLMSAVALA RAA SST A+ADADA+EDWWW
Sbjct:  351 STAAAVAWSLRNPDDGESVAPPAPHQQQQGKAGDVRGRFSRATVLALASLVLARRLARAGGPCLPPRVQATMGLGDGDALLLVSEGLRLARRAFETELCDDSQLQQHSATAAAAEGGLRRKDFLGGEVLLEKKVEGPAASHPSGTTIARSLLEWLTDSEDGRDAPEFAQGIPLSAATVSSSCSPREKSPSPSGCSVDHDRAPSPGGVTASDGATRRGKRALSSAYHDPRGGSGVSGEEGGPDARKWQRLGSPPGGPNGRDSGSASPRSRAADGDCAAPAEKRAGSSTEEYASAADAFPSLPPSTETSPPPRTPSQDAMYSDGATPRSPPSFSAGGASSISGDTTLSGGRRPRGWGRVLFSAQSSDKMSEATQSPPRTRGPPAALSASSPEERNARWEVLADRILEALDERHGGVVGGISAGADGCCGGLSTPEGEGNDSSSSGFAAGVAPILPDRCPLPRALAGDTVKSSPPGYPPFSPIXXXXXXPVFHDLGDHGAPDEQGEEALTSSRVSSAVACGGXXXXXXXXXXERTGGVXXXXXXXXXXXXGRGVRAQGLGVVAAGCTTLMSAVALACRAASSSTVADADADAREDWWW 945          
BLAST of mRNA_Ecto-sp13_S_contig9391.20988.1 vs. uniprot
Match: D7FYP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP4_ECTSI)

HSP 1 Score: 709 bits (1830), Expect = 1.670e-245
Identity = 457/608 (75.16%), Postives = 463/608 (76.15%), Query Frame = 0
Query:    2 TAASVAWSLRNPDDGKSVAPPAPHQQQE--GKAGDVRGRFSRATVLALASLVLARRLARAGGPCLPPRVQATMGLGDDDALLLVSEGLRLARRAFETELCDDSQRQQHPPSAAAA-----EEGLRGRDLLGGEVLLERKVGGPAA-SHPSGTTVARSLLEWLTDSEDGRDAPEFAQGLPLSAATVSSSCSPRGKSPSPSGGSVDHDRAPSTGSVTASDSATRHSKRAHSSAYHDARGGRGVSGEEGGPAARKRQRLGSLPGGANGWDSGSASPCSRAADRGCAAPAEERAGSSTEEYASAADAFPSPPPSTEXXXXXRTPSQDAMYSDGATPRSPPSFSAGGASFVSGDTTLSSDRRPRGWGRVLFSAQSSDKMSEATQSPPRTRGPPTALSASSPEERNARWEVLADRVLEALDDRHGGVVGGSS-AGADGSCGGLLTPEGEGNGSSSSGFAAEVAPILPDRCPLPRALAGDTVRSSPPGSRPFSPITPPAPPPVFHDLGAHGTPGEQGEEALTSSRVSSTADRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXGR-----GVRAQGLGVVAAGCTTLMSAVALAFRAAPSSTAAEADADAQEDWWW 595
            TAA+VAWSLRNPDDGKSVAPPAPHQQQ+  GKAGDVRGRFSRATVLALASLVLARRLARAGG CLPPRVQATMGLGD DALLLVSEGLRLARRAFETELCDDS                 E GLRGRD LGGEVLLERKV GPA  SHPSGTT+AR LLEWLTDS+DGRDAPEFAQGLPLS ATVSSSCSPR KSPSPS GSV HDR PS G VTASD ATR  KRA SSAYHDARGG GV  EEGGPAARKRQRLGS PGG +G  SGSASP SRAADR C APAEERAGSSTEEYASAADAFPSPPPST       TPSQDAM SDGATPRSPPSFSAGGASFVSGDTTLS  RRPRGWGRVLFSAQSSDKMSEATQSPPRTRGPP A SASSPEERNARWEVLADRVLEALDDRHGGVVGGSS AGADG CGGL TPE                                       GS PFSPITPP    VFHD                             XXXXXXXXXXXXXXXXXXXXXXXXXXX       G RAQGLGVVAAGCTTLMSAVALAFRAA SSTAAEA+ADAQEDWWW
Sbjct:  350 TAAAVAWSLRNPDDGKSVAPPAPHQQQQQHGKAGDVRGRFSRATVLALASLVLARRLARAGGACLPPRVQATMGLGDGDALLLVSEGLRLARRAFETELCDDSXXXXXXXXXXXXXXXXXEGGLRGRDFLGGEVLLERKVEGPATGSHPSGTTIARPLLEWLTDSDDGRDAPEFAQGLPLSTATVSSSCSPREKSPSPSRGSVAHDRVPSPGRVTASDGATRRGKRARSSAYHDARGGSGVPREEGGPAARKRQRLGSPPGGPSGRVSGSASPRSRAADRSCFAPAEERAGSSTEEYASAADAFPSPPPSTSPPP--HTPSQDAMDSDGATPRSPPSFSAGGASFVSGDTTLSGGRRPRGWGRVLFSAQSSDKMSEATQSPPRTRGPPAAPSASSPEERNARWEVLADRVLEALDDRHGGVVGGSSSAGADGCCGGLSTPE---------------------------------------GSPPFSPITPPGXXTVFHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARAQGLGVVAAGCTTLMSAVALAFRAASSSTAAEAEADAQEDWWW 916          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9391.20988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K008_9PHAE5.370e-31686.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYP4_ECTSI1.670e-24575.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9391contigEcto-sp13_S_contig9391:4549..6336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9391.20988.1mRNA_Ecto-sp13_S_contig9391.20988.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9391 4549..6336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9391.20988.1 ID=prot_Ecto-sp13_S_contig9391.20988.1|Name=mRNA_Ecto-sp13_S_contig9391.20988.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=596bp
STAASVAWSLRNPDDGKSVAPPAPHQQQEGKAGDVRGRFSRATVLALASL
VLARRLARAGGPCLPPRVQATMGLGDDDALLLVSEGLRLARRAFETELCD
DSQRQQHPPSAAAAEEGLRGRDLLGGEVLLERKVGGPAASHPSGTTVARS
LLEWLTDSEDGRDAPEFAQGLPLSAATVSSSCSPRGKSPSPSGGSVDHDR
APSTGSVTASDSATRHSKRAHSSAYHDARGGRGVSGEEGGPAARKRQRLG
SLPGGANGWDSGSASPCSRAADRGCAAPAEERAGSSTEEYASAADAFPSP
PPSTETSPPPRTPSQDAMYSDGATPRSPPSFSAGGASFVSGDTTLSSDRR
PRGWGRVLFSAQSSDKMSEATQSPPRTRGPPTALSASSPEERNARWEVLA
DRVLEALDDRHGGVVGGSSAGADGSCGGLLTPEGEGNGSSSSGFAAEVAP
ILPDRCPLPRALAGDTVRSSPPGSRPFSPITPPAPPPVFHDLGAHGTPGE
QGEEALTSSRVSSTADRRGGGGGGSGVSAEGTGGVGAASLATAAAAAGRG
VRAQGLGVVAAGCTTLMSAVALAFRAAPSSTAAEADADAQEDWWW*
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