prot_Ecto-sp13_S_contig9388.20984.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9388.20984.1
Unique Nameprot_Ecto-sp13_S_contig9388.20984.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.670e-50
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL 86
            MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAV+ILGEFVL
Sbjct:  416 MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVTILGEFVL 501          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 131 bits (329), Expect = 9.280e-34
Identity = 56/86 (65.12%), Postives = 71/86 (82.56%), Query Frame = 0
Query:    1 MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL 86
            MIRAI+ + QKKA+ SGNK+ QY  CCC CCFWCL+ C++FINKNAY+QTA+FST FC S + AF+LIARNI RV AVS++ EF++
Sbjct:  437 MIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMI 522          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A7S1XUX7_9STRA (Choline transporter-like protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUX7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 9.380e-33
Identity = 53/85 (62.35%), Postives = 71/85 (83.53%), Query Frame = 0
Query:    1 MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFV 85
            ++R  + Y Q+KA++SG+KV +Y+  CC CC WCLE  L+F+N+NAY+QTAIFST+FC SARNAF+LIARNIARV AV+++G FV
Sbjct:  138 IVRTAIAYAQRKAKESGSKVAEYVLACCTCCIWCLEKFLKFLNRNAYIQTAIFSTSFCPSARNAFFLIARNIARVGAVTLVGGFV 222          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 8.240e-31
Identity = 54/84 (64.29%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    2 IRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFV 85
            IRA+LTY+QKK +KSG+K  Q + CC  C FWCLE C+RFINKNAY+Q AIFST+FC S++NAF+LIARN+ RV AV+++ +FV
Sbjct:  488 IRAVLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVRFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFV 571          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK)

HSP 1 Score: 122 bits (306), Expect = 1.510e-30
Identity = 52/85 (61.18%), Postives = 72/85 (84.71%), Query Frame = 0
Query:    2 IRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL 86
            IRA++ Y+QKKA++SGNK+ Q + C   CC WCLE C++F+NKNAY+QTAIF  +FC++A+ AF+LIARNI R+AAVS++G+FVL
Sbjct:  504 IRAVIAYMQKKAKQSGNKLAQIVLCVIQCCMWCLEKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSLVGDFVL 588          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 3.620e-30
Identity = 53/84 (63.10%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    2 IRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFV 85
            IRA+LTY+QKK +KSG+K  Q + CC  C FWCLE C++FINKNAY+Q AIFST+FC S++NAF+LIARN+ RV AV+++ +FV
Sbjct:  447 IRAMLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVKFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFV 530          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A7R9YAE8_9STRA (Choline transporter-like protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAE8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.600e-29
Identity = 49/86 (56.98%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    1 MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL 86
            +IRA++TY+QKKA++SGNKV +YI C C CCFWC E C++F+++NAY+QTAIF   FC+ A++AF+LI RN  RV A++ +G FV+
Sbjct:  535 IIRAVITYMQKKAKESGNKVAEYILCLCQCCFWCFEKCVKFLSQNAYIQTAIFGKGFCSGAKDAFFLILRNFLRVGALTAVGGFVM 620          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A1Z5JIP5_FISSO (Choline transporter-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIP5_FISSO)

HSP 1 Score: 118 bits (296), Expect = 3.410e-29
Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    2 IRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL 86
            IR I+  +QKKA+++ NK+ +YI CCC CCFWCLE CL+FINKNAY+QTAIFST+FC S R +F+LI RN ARV AV+ +   VL
Sbjct:  503 IRYIIAKLQKKAKETQNKIAEYILCCCQCCFWCLERCLKFINKNAYIQTAIFSTSFCKSCRASFFLIFRNAARVGAVTYVSSAVL 587          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: A0A7S4QYJ3_9STRA (Choline transporter-like protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYJ3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.070e-29
Identity = 46/78 (58.97%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAV 78
            +IR I+ Y QKKA+++ +K+   + CCC CCF+CLE C++F+NKNAY+ TAIF+TNFCTSAR AF+LI RN AR+ A+
Sbjct:   78 LIRTIIAYFQKKAKEADSKIATAVLCCCQCCFYCLEKCVKFLNKNAYIHTAIFATNFCTSAREAFFLILRNAARIGAI 155          
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Match: W7TBK4_9STRA (Choline transporter-like protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBK4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.520e-29
Identity = 52/85 (61.18%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    2 IRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL 86
            IR+I+ YIQK  ++S NKV QY+ CCC C FWCLE  L+F+NKNAY+QTA+  T+FCTS + AF+LIARNI R+ AVS++ EFV+
Sbjct:  479 IRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVI 563          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9388.20984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW76_9PHAE2.670e-5098.84Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA9.280e-3465.12Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A7S1XUX7_9STRA9.380e-3362.35Choline transporter-like protein n=1 Tax=Phaeomona... [more]
A0A6H5L007_9PHAE8.240e-3164.29Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S3Y6D2_HETAK1.510e-3061.18Choline transporter-like protein n=1 Tax=Heterosig... [more]
D8LIJ7_ECTSI3.620e-3063.10Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7R9YAE8_9STRA2.600e-2956.98Choline transporter-like protein n=1 Tax=Pinguioco... [more]
A0A1Z5JIP5_FISSO3.410e-2962.35Choline transporter-like protein n=2 Tax=Fistulife... [more]
A0A7S4QYJ3_9STRA5.070e-2958.97Choline transporter-like protein n=1 Tax=Ditylum b... [more]
W7TBK4_9STRA6.520e-2961.18Choline transporter-like protein n=6 Tax=Monodopsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 1..86
e-value: 6.4E-29
score: 101.2
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 3..86
NoneNo IPR availablePANTHERPTHR12385:SF12SOLUTE CARRIER FAMILY 44 (CHOLINE TRANSPORTER), MEMBER 1A-RELATEDcoord: 3..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9388contigEcto-sp13_S_contig9388:4929..5690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9388.20984.1mRNA_Ecto-sp13_S_contig9388.20984.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9388 4929..5699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9388.20984.1 ID=prot_Ecto-sp13_S_contig9388.20984.1|Name=mRNA_Ecto-sp13_S_contig9388.20984.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
MIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQT
AIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like