prot_Ecto-sp13_S_contig937.20968.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig937.20968.1
Unique Nameprot_Ecto-sp13_S_contig937.20968.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
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BLAST of mRNA_Ecto-sp13_S_contig937.20968.1 vs. uniprot
Match: D8LN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN79_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 3.080e-82
Identity = 124/140 (88.57%), Postives = 128/140 (91.43%), Query Frame = 0 
Query:    1 MKYGIVACFVWLYTAADALISTAPIGSGAGASRRGRIHRHLSGATLLALPWRSASGREMETRRLCAADSIHRSYPMMCGVADYDQQELVLREFALPLQASPGSYERRVRAECLLEGGETATVVRWHISHADEATGRAHIE 140
            MKY IVA FVWLYTAADALISTAPIGS AGASRRGRIHRHLS  TLL LP RSA+ +EM TRRLCAADSIH+SY MMCGVADYDQQELVLREFALPLQASPGSYERRVRAECL EGGE ATVVRWHISHADEATGRAH+E
Sbjct:    1 MKYSIVAWFVWLYTAADALISTAPIGSSAGASRRGRIHRHLSAVTLLTLPRRSAARQEMGTRRLCAADSIHKSYSMMCGVADYDQQELVLREFALPLQASPGSYERRVRAECLREGGEAATVVRWHISHADEATGRAHVE 140
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BLAST of mRNA_Ecto-sp13_S_contig937.20968.1 vs. uniprot
Match: A0A6H5JKU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU9_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.080e-75
Identity = 121/140 (86.43%), Postives = 125/140 (89.29%), Query Frame = 0 
Query:    1 MKYGIVACFVWLYTAADALISTAPIGSGAGASRRGRIHRHLSGATLLALPWRSASGREMETRRLCAADSIHRSYPMMCGVADYDQQELVLREFALPLQASPGSYERRVRAECLLEGGETATVVRWHISHADEATGRAHIE 140
            MKY IVA FVW YTAADAL +TAPIGS AGAS RGRIHRHLS ATLLALP RS +G+ M TRRLCAADSIHRSYPMM GVAD D QELVLREFALPLQASPGSYERRVRAECL EGGETATVVRWHISHADEATGRAH+E
Sbjct:    1 MKYSIVAWFVW-YTAADALFATAPIGSSAGASHRGRIHRHLSAATLLALPRRSDAGQGMGTRRLCAADSIHRSYPMMRGVAD-DHQELVLREFALPLQASPGSYERRVRAECLREGGETATVVRWHISHADEATGRAHVE 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig937.20968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN79_ECTSI3.080e-8288.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKU9_9PHAE2.080e-7586.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig937contigEcto-sp13_S_contig937:3932..4351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig937.20968.1mRNA_Ecto-sp13_S_contig937.20968.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig937 3932..4351 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig937.20968.1 ID=prot_Ecto-sp13_S_contig937.20968.1|Name=mRNA_Ecto-sp13_S_contig937.20968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
MKYGIVACFVWLYTAADALISTAPIGSGAGASRRGRIHRHLSGATLLALP
WRSASGREMETRRLCAADSIHRSYPMMCGVADYDQQELVLREFALPLQAS
PGSYERRVRAECLLEGGETATVVRWHISHADEATGRAHIE
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