prot_Ecto-sp13_S_contig9348.20948.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9348.20948.1
Unique Nameprot_Ecto-sp13_S_contig9348.20948.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length238
Homology
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: D8LLP2_ECTSI (Protein cereblon n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP2_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 1.200e-125
Identity = 195/237 (82.28%), Postives = 198/237 (83.54%), Query Frame = 0
Query:    1 MPRWRGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRPRSGEQERRQRQQGYVLLSSGSPPSXXXXXXXTSPLLPXXXXXXXXXXXXXXXXXALGSSRPTTTATAAGGGAMNEPGLGPASFFGLRRPALVTPR 237
            MPR RGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLE+SRRR LCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVG PEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRP SGEQE RQRQQ   LLSSGSP S       +S LLP                 ALGSSRP TTATA G G +NEP LGPASFFGLRRPALVTPR
Sbjct:  359 MPRRRGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEQSRRRELCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGTPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRPGSGEQEHRQRQQRSGLLSSGSPSSPRASPHSSSSLLPLPSPVAGGASGSGGRG-ALGSSRPATTATAGGEG-VNEPELGPASFFGLRRPALVTPR 593          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: A0A6H5KP54_9PHAE (CULT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP54_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 5.170e-105
Identity = 165/204 (80.88%), Postives = 168/204 (82.35%), Query Frame = 0
Query:    1 MPRWRGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRPRSGEQERRQRQQGYVLLSSGSPPSXXXXXXXTSPLLPXXXXXXXXXXXXXXXXXALGSSRPT 204
            MPR RGKLDPTLFSFWLAANLPLDD ARQELLMLDSVVMRLR+EIKHLEESRRR LCCASC+RGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTC YCAFC EHLGWRFTAIRP SGEQERRQRQ   VLLSSGSP S       TS LLP                 ALGSS P+
Sbjct:  412 MPRRRGKLDPTLFSFWLAANLPLDDVARQELLMLDSVVMRLRVEIKHLEESRRRELCCASCNRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCAYCAFCMEHLGWRFTAIRPGSGEQERRQRQPRSVLLSSGSPLSPPASPHATSSLLPLPSTPLAGEASGSGGRGALGSSAPS 615          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: A0A835YMI6_9STRA (Protein cereblon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.440e-40
Identity = 72/129 (55.81%), Postives = 93/129 (72.09%), Query Frame = 0
Query:   13 FSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEE-HSWFPGYAWTCVYCAFCNEHLGWRFTAI 140
            FSFWLA++LPL DDARQ LL  +SVV RLR  ++HL+ + +  L CA C+  +A     F++PGAEG VGAYVNP G+VHQT+T+R+ARN+ L  +P     SWFPG+AWT  YC  C+ HLGW+FT I
Sbjct:  332 FSFWLASSLPLGDDARQALLETNSVVERLRAGVRHLQRAAKLPLRCAHCNTPIAQPSHAFSVPGAEGAVGAYVNPAGFVHQTITLREARNVRLQAVPPTATDSWFPGFAWTVAYCRRCDAHLGWKFTPI 460          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: A0A812CDW9_SEPPH (Protein cereblon n=2 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812CDW9_SEPPH)

HSP 1 Score: 146 bits (369), Expect = 8.000e-38
Identity = 71/141 (50.35%), Postives = 92/141 (65.25%), Query Frame = 0
Query:    8 LDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRPRSGEQE 148
            LDP  FS+W+  NLPLDD  R  LL +DS V RLR E+  ++      LCC  CD  VA + DVF++   EG + AYVNP GYVH+T+TV  A+ L L+G P  E+SWFPGYAWT + C+ C  H+GWRFTA + +   Q+
Sbjct:  301 LDPIDFSYWVLQNLPLDDSRRIHLLSIDSAVQRLRCELSIMQSCS--ILCCRECDLEVANKNDVFSM-SLEGPLAAYVNPGGYVHETITVYKAKGLTLMGDPSTENSWFPGYAWTIIKCSRCGAHMGWRFTAAKRKLSPQK 438          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: UPI0014581C3B (protein cereblon-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581C3B)

HSP 1 Score: 143 bits (361), Expect = 1.560e-36
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 0
Query:    9 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIR 141
            DP   S+W+  NLPLDD  R  LL +DS V RLR  +  +E+     LCC  C   VA + DVF+L   EG +GAYVNP GYVH+T+TV  A NL L+G P  EHSWFPGYAWT   C  CN H+GW+FT+ +
Sbjct:  317 DPVELSYWVTQNLPLDDGLRVNLLSIDSAVQRLRCALSIIEKCS--ILCCKGCGCQVANKRDVFSL-SIEGPLGAYVNPGGYVHETMTVHKAHNLNLIGRPSTEHSWFPGYAWTIAQCRRCNSHMGWKFTSTQ 446          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: UPI00201F19B2 (protein cereblon-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI00201F19B2)

HSP 1 Score: 142 bits (359), Expect = 2.550e-36
Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    9 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTA 139
            DPT  S+W+A NLPLDD  R  LL L+S V RLR E+  +++     LCC  C   +  + +VF++   EG +GAYVNP G+VH+T+TV   +NL L+G P  EHSWFPGYAWT V C  C+ H+GWRFTA
Sbjct:  305 DPTELSYWVAQNLPLDDSMRLHLLGLNSAVQRLRCELSIIQKCT--VLCCKDCGTQITHKNEVFSM-SMEGPLGAYVNPGGHVHETLTVYKIQNLGLIGRPSTEHSWFPGYAWTIVECKHCSSHMGWRFTA 432          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: A0A8B6BRU4_MYTGA (Protein cereblon n=3 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BRU4_MYTGA)

HSP 1 Score: 142 bits (358), Expect = 3.100e-36
Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = 0
Query:    9 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTA 139
            DP   S+W+  NLPLDD  R  LL LDS V RLR  +  +E+     +CC  C   VA   DVF+L   EG +GAYVNP G+VH+T+TV  ++N+ L+G P +EHSWFPGYAWT  YC  C  H+GW+FTA
Sbjct:  288 DPIELSYWVCQNLPLDDSQRLNLLSLDSAVQRLRCALSIMEKCS--VICCRECKTHVALTNDVFSL-SLEGPLGAYVNPHGHVHETLTVYKSQNINLMGRPTKEHSWFPGYAWTIAYCRRCTNHMGWKFTA 415          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: UPI001CF4E721 (protein cereblon-like isoform X1 n=6 Tax=Acropora TaxID=6127 RepID=UPI001CF4E721)

HSP 1 Score: 141 bits (355), Expect = 9.590e-36
Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   10 PTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIR 141
            PT FSFW+AAN+PLDDD R ++L +D    RLR E++ + +    A CC+ CD  +A +GD+F++   +G +GAYVNP G VH+T+T   A++  L G P  E+SWFPGYAWT   CA C  HLGWRFTA++
Sbjct:  302 PTEFSFWVAANMPLDDDLRLQVLGIDCPTQRLRRELEIVRKCG--AFCCSECDTKIAEKGDLFSM-SLDGPLGAYVNPNGCVHETLTFYRAKSFRLRGRPTTENSWFPGYAWTIAECAQCGNHLGWRFTAVK 430          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: K1QI70_CRAGI (Protein cereblon n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QI70_CRAGI)

HSP 1 Score: 140 bits (353), Expect = 1.610e-35
Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 0
Query:   10 PTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIR 141
            P   S+W+  NLPLDDD R  L+ +DS V RLR  +  +++    +LCC  C+  +A + DVF+L   EG +GAYVNP GYVH+T+TV  A+NL L+G   +EHSWFPGYAWT   C  C  H+GW+FTA R
Sbjct:  297 PVELSYWVIQNLPLDDDLRLNLMGIDSAVQRLRCSLSIVQKCS--SLCCKECNTNIANKNDVFSL-SVEGPLGAYVNPQGYVHETMTVYKAQNLNLIGRATKEHSWFPGYAWTIAQCRRCAFHIGWKFTATR 425          
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Match: UPI001BB14762 (protein cereblon-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB14762)

HSP 1 Score: 140 bits (352), Expect = 2.050e-35
Identity = 67/134 (50.00%), Postives = 92/134 (68.66%), Query Frame = 0
Query:   10 PTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEESRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRPR 143
            P+ FSFW+A+N+PLDD  R  LL +DS V RLR E++ L++     LCC  C+  +A + DVF +   +G + AYVNP GYVH+T+TV  A+NL L+G P +E+SWFPGYAWT + C  C  H+GW+FTA   +
Sbjct:  299 PSDFSFWVASNMPLDDAGRIGLLKIDSAVQRLRRELELLQKCT--VLCCRECNIQIANKSDVFCM-SLDGPMAAYVNPGGYVHETLTVYRAQNLNLIGRPSKENSWFPGYAWTILQCRRCTSHMGWKFTATEKK 429          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9348.20948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLP2_ECTSI1.200e-12582.28Protein cereblon n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KP54_9PHAE5.170e-10580.88CULT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YMI6_9STRA4.440e-4055.81Protein cereblon n=1 Tax=Tribonema minus TaxID=303... [more]
A0A812CDW9_SEPPH8.000e-3850.35Protein cereblon n=2 Tax=Sepia pharaonis TaxID=158... [more]
UPI0014581C3B1.560e-3652.63protein cereblon-like n=1 Tax=Pecten maximus TaxID... [more]
UPI00201F19B22.550e-3651.91protein cereblon-like n=2 Tax=Haliotis TaxID=6452 ... [more]
A0A8B6BRU4_MYTGA3.100e-3651.91Protein cereblon n=3 Tax=Mytilus galloprovincialis... [more]
UPI001CF4E7219.590e-3650.76protein cereblon-like isoform X1 n=6 Tax=Acropora ... [more]
K1QI70_CRAGI1.610e-3550.76Protein cereblon n=2 Tax=Crassostrea gigas TaxID=2... [more]
UPI001BB147622.050e-3550.00protein cereblon-like n=1 Tax=Lytechinus variegatu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1480coord: 6..47
e-value: 1.8E-11
score: 45.8
NoneNo IPR availableGENE3D2.170.150.20coord: 48..159
e-value: 7.0E-32
score: 111.9
NoneNo IPR availablePANTHERPTHR14255ATP-DEPENDENT PROTEASE CEREBLONcoord: 9..143
NoneNo IPR availablePANTHERPTHR14255:SF12PROTEIN CEREBLONcoord: 9..143
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..10
score: 0.49
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 56..142
e-value: 1.2E-6
score: 28.7
IPR034750CULT domainPROSITEPS51788CULTcoord: 53..237
score: 40.263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9348contigEcto-sp13_S_contig9348:997..3707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9348.20948.1mRNA_Ecto-sp13_S_contig9348.20948.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9348 319..3815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9348.20948.1 ID=prot_Ecto-sp13_S_contig9348.20948.1|Name=mRNA_Ecto-sp13_S_contig9348.20948.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MPRWRGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEE
SRRRALCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDA
RNLVLVGIPEEEHSWFPGYAWTCVYCAFCNEHLGWRFTAIRPRSGEQERR
QRQQGYVLLSSGSPPSPPASPHSTSPLLPLPSPAVAGGASGSGGRGALGS
SRPTTTATAAGGGAMNEPGLGPASFFGLRRPALVTPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004910Yippee/Mis18/Cereblon
IPR034750CULT