prot_Ecto-sp13_S_contig934.20938.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig934.20938.1
Unique Nameprot_Ecto-sp13_S_contig934.20938.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length692
Homology
BLAST of mRNA_Ecto-sp13_S_contig934.20938.1 vs. uniprot
Match: D8LMJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ5_ECTSI)

HSP 1 Score: 762 bits (1968), Expect = 1.130e-270
Identity = 458/621 (73.75%), Postives = 469/621 (75.52%), Query Frame = 0
Query:   71 KWNKPRKTAGNDGTDXXXXXXXXXXXXXXXXXXXXXXXXXXEEEGEXXXXXXXXXXXXXXXXXXSELSGSEDEEGTPKKPKKGLLGLGDRLAARAAAIAKTAGNALQAVTGEGRRRETPPWARAACFRRCNCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPLARTPPPPYALRLFLEYMDSRTVARCAHTSKEWHCECYRRSEEGVPMHPTYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSFGQLFTAGQRRVTAWRRQETEVDTERDQSTPSAGSGSTKSGKSSETSHSEGDAAPRFEVSWQSAGVCLRDTAPFTMILPVNSSIICCSSNGSIREWSLAHEVKNTRFLAQMWEHNGYITDVAFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKECLHTVKPKISDCGTLQSVTKSDFHLYVGSSIGRIVVFALGRVCQRPEKHRCHLYEKPQWFCEQETFDLGKDPVQHMVCGGVGGKFKYLFAGARDGTIQVWNVPKESFGHTKVCTFREHKRAITALSLTKAHLFSASDEGHVRIWSLGTLCLQRVVRQERRIKSIWVHHAPPDSPDPGNGSLFLGLATGLVLVYPITDAV 691
            KW KPRKTAGNDGTDXXXXXXXXXXXXXXXXXXXXXXXXXX   G XXXXXXXXXXXXXXXXXX        E+GTPKKPKKGLLGLGDRLAARAAAIAKTAGNALQAVTGEGRRRETPPWARAACFRRCNCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPL RTPPPPY LRLFLEYMDSRTVARCAHTSKEWH ECY+R+EEGVPMHP YIGMHFMELGSQVDACQDKIDGMFFHQPPTGS GQLFTAGQRRVTAWRRQETEVDTER+QST S GSGSTKSG+SSETSHSEGDAAPR EVSWQSAGVCLRDTAPFTMILPVNS           +  ++A    NT      W+        AFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATK+CLHTVKPKISDCGT                                                                                    VWNVPK SFGHTKVCTFREHKRAITALSLTKAHLFSASDEGHV             VRQ+RRIK IWVHHAPPDSPDPGNGSLFLGLATGLVL YPITDAV
Sbjct:   27 KWKKPRKTAGNDGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXX----EDGTPKKPKKGLLGLGDRLAARAAAIAKTAGNALQAVTGEGRRRETPPWARAACFRRCNCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPLERTPPPPYVLRLFLEYMDSRTVARCAHTSKEWHRECYQRNEEGVPMHPAYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSPGQLFTAGQRRVTAWRRQETEVDTEREQSTASEGSGSTKSGESSETSHSEGDAAPRIEVSWQSAGVCLRDTAPFTMILPVNSR--------PRKNPNMAFHSANTSSCFLAWQ--------AFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKDCLHTVKPKISDCGT------------------------------------------------------------------------------------VWNVPKASFGHTKVCTFREHKRAITALSLTKAHLFSASDEGHV-------------VRQDRRIKCIWVHHAPPDSPDPGNGSLFLGLATGLVLAYPITDAV 530          
BLAST of mRNA_Ecto-sp13_S_contig934.20938.1 vs. uniprot
Match: A0A6U4D539_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D539_9STRA)

HSP 1 Score: 204 bits (518), Expect = 5.190e-54
Identity = 141/482 (29.25%), Postives = 216/482 (44.81%), Query Frame = 0
Query:  187 ETPPWARAACFRRCNCNHGVPT-DSTAFVPLQEGRKLEH-EAVGVVTVRTEPLEGAELEFENRPPLARTPPPPYALRLFLEYMDSRTVARCAHTSKEWHCECYRRSEEGVPMHPTYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSFGQLFTAGQRRVTAWRRQETEVDTERDQSTPSAGSGSTKSGKSSETSHSEGDAAPRFEVSWQSAGVCLRDTAPFTMILPVNSSIICCSSNGSIREWSLAHEVKNTRFLAQMWEHNGYITDVAFTAPSVG-----FCKAHGAPQHSCYMYSVSDDRYLKVWDLATKECLHTVKPKISDCGTLQSVTKSDFHLYVGSSIGRIVVFALGRVCQRPEKHRCHLYEKPQW-FCEQETFDLGKDPVQHMVCGGVGGKFKYLFAGARDGTIQVWNVP-KESFGHTKVCTFREHKR--AITALSLTKAHLFSASDEGHVRIWSLGTLCLQRVVRQERRIKSIW 657
            +TP WA     +RCNC  GV   DS  + PL   R +   E    + VR E     + EF    P     P    L    +Y+ ++ +A+ A   + W         E + M   +I M  +    +      +++            G+L+TAG +RV  W  +                                         +++     +R+TA    I  VN +++ C+SNGSIR+WSL H  KN  ++A  WEH  +I D   + P        FC+         ++YSVSDDR +KVWD   K CL ++ P    CGT++SV +S  HLYVGSS G I V+ L R C R ++H C + E     FC Q     GK  +  + CGG   + K+L++ + DGT +VW++P K  + H  +     H    A++    T AHLF+A  +  +R+W+L T+ LQ+V+  E   K ++
Sbjct:   96 KTPKWAEKNELKRCNCLDGVDNGDSRVYYPLNLPRFVTSLECPEGIRVRME-----DPEFGWAEPQKVMNPAAEVLDFVFQYVGAKELAKVATVDRLWR--------ERIDMQTHFIDMKQLANDYEHQVHSGRVESCLEFN------GRLYTAGDKRVKVWNLE-----------------------------------------TYECLAEAVRETAVINDIQVVNGALLVCASNGSIRQWSLTHNPKNIAYVAAYWEHRSWINDFIPSEPEPDDDGEMFCR---------FLYSVSDDRTVKVWDANKKVCLFSMDPPNRTCGTMRSVARSARHLYVGSSNGVIYVYPLKRECDREDRHGCSISEHGALPFCLQTELQHGKGIILQLECGGYRRQVKHLYSASTDGTFRVWSLPGKSGYEHECLRVIDAHAPGGALSCFCTTWAHLFTAGQDKVIRVWNLHTMELQKVLHPEELCKCMY 508          
BLAST of mRNA_Ecto-sp13_S_contig934.20938.1 vs. uniprot
Match: A0A7S2H458_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H458_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.390e-19
Identity = 75/311 (24.12%), Postives = 128/311 (41.16%), Query Frame = 0
Query:  264 LEYMDSRTVARCAHTSKEWHCECYRRSEEGVPMHPTYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSFGQLFTAGQRRVTAWRRQETEVDTERDQSTPSAGSGSTKSGKSSETSHSEGDAAPRFEVSWQSAGVCLRDTAPFTMILPVNSSIICCSSNGSIREWSLAHEVKNTRFLAQMWEHNGYITDVAFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKECLHTVKPKISDCGTLQSVTKSDFHLYVGSSIGRIVVFALGRV-CQRPEKHRCHLYEKPQWFCEQETF-DLGKDPVQHMVCGG 572
            + Y++ R++ R +  S  +  E          + P Y  M    +  +  A + ++ G+  ++      G+ +T G + V  W+ Q    ++E                        E D               + D  P T    ++ +++  SSNG++R W++ H +K     A MWEHN  + D +           H        +++ SDDR +K WDL    C HT++P      T++SV  SD  L+VG S G I V+      C R ++H C++  +P  +C Q+T  D     V  +V GG
Sbjct:    1 MPYLNPRSLGRASSVSVVFWSE--------AAVQPHYDDMKRFGVEMKFTAHEKRVKGVVSYR------GRCYTGGDKCVKVWKLQRASAESE------------------------EFDRVELIHT--------VHDLCPVTFCQEIDGNLLVGSSNGAVRMWTMPHSIKKMNQRAVMWEHNALVHDAS-----------HWQRGKFSTLFTASDDRTIKAWDLHQVRCEHTLEPLDRRGATMRSVAVSDSFLFVGHSRGVIYVYLTDTSSCLREDRHECYISPRP--YCLQKTLQDTEGQIVSSIVVGG 252          
BLAST of mRNA_Ecto-sp13_S_contig934.20938.1 vs. uniprot
Match: A0A835Z1Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.430e-7
Identity = 41/113 (36.28%), Postives = 56/113 (49.56%), Query Frame = 0
Query:  586 DGTIQVWNVPKESFGHTKVCT-----FREHKRAITALSLTKAHLFSASDEGHVRIWSLGTLCLQRVVRQERRIKSIWVHHAPPDSP-----------DPGNGSLFLGLATGLV 682
            DG++ VW  P+  FGH                AIT +++  AH+ SA D G VRI+S GTL LQRV+R   R+KS+ +      +            D G G L+LGL+ G V
Sbjct:    3 DGSLWVWAAPRRRFGHRGRALRSGGXXXXXGAAITHIAVGNAHVLSADDAGEVRIYSAGTLRLQRVLRAGARVKSVCLRQPAAAATAXXXXXXXRGGDDG-GRLYLGLSDGTV 114          
BLAST of mRNA_Ecto-sp13_S_contig934.20938.1 vs. uniprot
Match: A0A8J4PZL7_9MYCE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZL7_9MYCE)

HSP 1 Score: 56.6 bits (135), Expect = 7.300e-5
Identity = 48/184 (26.09%), Postives = 82/184 (44.57%), Query Frame = 0
Query:  460 GFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKECLHTVKPKISDCGTLQSVTKSDFHLYVGSSIGRIVVFALGRVCQRPEKHRCHLYEKPQWFCEQETFDLGKDPVQHMVCGGVGGKFKYLFAGARDGTIQVWNVPKESFGHTKVCTFREHKRAITALSLTKAHLF--SASDEGHVRIWSLGTL 641
            G   A    Q+S Y+ + S D  +KVWD+ T  CLHTV  +++ C +++   + D  + V      +    +G  CQ    H     +         TF      + H   G +    KY+F+   DG I++++V K S  HT    F E+ + +T +  TK  +   + S +G  +++   TL
Sbjct:   52 GVVYAMDVSQNSQYLVTASADAKVKVWDVQTGICLHTVNFEVA-CRSIE-FNQGDSQILV------VTDQVMG--CQALV-HVLDFDQATGKLTTNYTFQSPNCKITHATWGPLN---KYIFSSGEDGAIRIYDVEKRSLHHT----FVENTKQVTRIEWTKHRIMFLTCSKDGTAKLYDTKTL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig934.20938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMJ5_ECTSI1.130e-27073.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U4D539_9STRA5.190e-5429.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2H458_9STRA1.390e-1924.12Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835Z1Z8_9STRA5.430e-736.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J4PZL7_9MYCE7.300e-526.09Eukaryotic translation initiation factor 3 subunit... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 435..487
e-value: 0.093
score: 21.8
coord: 553..593
e-value: 87.0
score: 4.8
coord: 600..637
e-value: 0.004
score: 26.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 604..637
e-value: 0.042
score: 14.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 607..638
score: 9.372
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 473..496
score: 8.637
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 400..690
e-value: 1.9E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR44489FAMILY NOT NAMEDcoord: 45..648
coord: 576..685
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 474..488
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 580..594
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 9..28
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 5..34
score: 8.005
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 579..646
score: 11.919
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 5..32
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 413..676

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig934contigEcto-sp13_S_contig934:4370..16138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig934.20938.1mRNA_Ecto-sp13_S_contig934.20938.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig934 4370..16294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig934.20938.1 ID=prot_Ecto-sp13_S_contig934.20938.1|Name=mRNA_Ecto-sp13_S_contig934.20938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=692bp
MVVATQRGWQCKQCKEQNPDEEDFCDKCFAPRRASGAPRETCRTCLHRHS
TGKQCHVFIMNNKRRKRKAAKWNKPRKTAGNDGTDDEGSSSSGDSSGDSS
EEEEQGNNGGREEEGEDEDEDEDEDEEDGSSEDSSELSGSEDEEGTPKKP
KKGLLGLGDRLAARAAAIAKTAGNALQAVTGEGRRRETPPWARAACFRRC
NCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPL
ARTPPPPYALRLFLEYMDSRTVARCAHTSKEWHCECYRRSEEGVPMHPTY
IGMHFMELGSQVDACQDKIDGMFFHQPPTGSFGQLFTAGQRRVTAWRRQE
TEVDTERDQSTPSAGSGSTKSGKSSETSHSEGDAAPRFEVSWQSAGVCLR
DTAPFTMILPVNSSIICCSSNGSIREWSLAHEVKNTRFLAQMWEHNGYIT
DVAFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKECLHTVKPK
ISDCGTLQSVTKSDFHLYVGSSIGRIVVFALGRVCQRPEKHRCHLYEKPQ
WFCEQETFDLGKDPVQHMVCGGVGGKFKYLFAGARDGTIQVWNVPKESFG
HTKVCTFREHKRAITALSLTKAHLFSASDEGHVRIWSLGTLCLQRVVRQE
RRIKSIWVHHAPPDSPDPGNGSLFLGLATGLVLVYPITDAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR001876Znf_RanBP2
IPR017986WD40_repeat_dom
IPR036443Znf_RanBP2_sf
IPR036322WD40_repeat_dom_sf