prot_Ecto-sp13_S_contig924.20819.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig924.20819.1
Unique Nameprot_Ecto-sp13_S_contig924.20819.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length372
Homology
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BLAST of mRNA_Ecto-sp13_S_contig924.20819.1 vs. uniprot
Match: A0A6H5JXG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG7_9PHAE)

HSP 1 Score: 640 bits (1650), Expect = 6.340e-230
Identity = 340/369 (92.14%), Postives = 347/369 (94.04%), Query Frame = 0 
Query:    1 MTPPATASAASIAVMAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMTTPAYRQRQQRQQIFMPAGASSSNLAGHPRRRTPSGDREEVSLPRPRRCRSLQPLGLGGMDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEAELAAAEAATVAAGKAPTKAELAEAAVAAAMASKTVGEGGGADEVAMAALGPKRKKRTEKVRIDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRAAEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTAPEQRFKQFP 369
            MT PAT SAASIAV+AFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMT PA RQRQQR+QIFMPAGASS+ LAGH RRRTPSG REEVSLPRPRRCRSLQPLGLGGMDEM+D+DPLE GPDPDEILLQGEPELLRQQQ     EAELAAAEAATVAAGK PTKAELAEAAV   MASKT GEG GADEVAMAALGPKRKKR EKVR+DPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRA EVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPT+VHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFT PEQRFKQFP
Sbjct:    1 MTRPATTSAASIAVVAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMTMPAPRQRQQRRQIFMPAGASST-LAGHQRRRTPSGGREEVSLPRPRRCRSLQPLGLGGMDEMDDIDPLEGGPDPDEILLQGEPELLRQQQXXXXXEAELAAAEAATVAAGKGPTKAELAEAAVXXXMASKTAGEGVGADEVAMAALGPKRKKRAEKVRVDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRATEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTVVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQFP 368
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BLAST of mRNA_Ecto-sp13_S_contig924.20819.1 vs. uniprot
Match: D7G5D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D7_ECTSI)

HSP 1 Score: 451 bits (1160), Expect = 1.920e-157
Identity = 233/253 (92.09%), Postives = 235/253 (92.89%), Query Frame = 0 
Query:  119 MDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEAELAAAEAATVAAGKAPTKAELAEAAVAAAMASKTVGEGGGADEVAMAALGPKRKKRTEKVRIDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRAAEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTAPEQRFKQFPVL 371
            MDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYE ELAAAEAATVAAGKAPTKAELAE             EGGGADE AMAALGPKRKKR EK RIDPLMPRGGVAPNEWLDMA+LAEGVRGILVVCHTGLPKDKKRAAE+MNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFT PEQRFKQFPVL
Sbjct:    1 MDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEVELAAAEAATVAAGKAPTKAELAEXXXXXXXXXXXXREGGGADEAAMAALGPKRKKRVEKARIDPLMPRGGVAPNEWLDMADLAEGVRGILVVCHTGLPKDKKRAAEIMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQFPVL 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig924.20819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXG7_9PHAE6.340e-23092.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5D7_ECTSI1.920e-15792.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..371
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.658
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig924contigEcto-sp13_S_contig924:8103..13641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig924.20819.1mRNA_Ecto-sp13_S_contig924.20819.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig924 7143..13837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig924.20819.1 ID=prot_Ecto-sp13_S_contig924.20819.1|Name=mRNA_Ecto-sp13_S_contig924.20819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp
MTPPATASAASIAVMAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSS
SRFAGPLQMTTPAYRQRQQRQQIFMPAGASSSNLAGHPRRRTPSGDREEV
SLPRPRRCRSLQPLGLGGMDEMEDMDPLEAGPDPDEILLQGEPELLRQQQ
EEEDYEAELAAAEAATVAAGKAPTKAELAEAAVAAAMASKTVGEGGGADE
VAMAALGPKRKKRTEKVRIDPLMPRGGVAPNEWLDMANLAEGVRGILVVC
HTGLPKDKKRAAEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFE
VWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINED
FQFRLPGFTAPEQRFKQFPVL*
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