mRNA_Ecto-sp13_S_contig924.20819.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig924.20819.1
Unique NamemRNA_Ecto-sp13_S_contig924.20819.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig924.20819.1 vs. uniprot
Match: A0A6H5JXG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG7_9PHAE)

HSP 1 Score: 654 bits (1688), Expect = 1.730e-229
Identity = 352/396 (88.89%), Postives = 359/396 (90.66%), Query Frame = 2 
Query:  197 MTPPATASAASIAVMAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMTTPAYRQRQQRQQIFMPAGASSSNLAGHPRRRTPSGDREEVSLPRPRRCRSLQPLGLGGMDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEAELAAAEAATVAAGKAPTKAELAEAAVAAAMASKTVGEGGGADEVAMAALGPKRKKRTEKVRIDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRAAEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTAPEQRFKQFPVL*FYLRGASTLLPPSFCRDAR*SDYR 1384
            MT PAT SAASIAV+AFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMT PA RQRQQR+QIFMPAGASS+ LAGH RRRTPSG REEVSLPRPRRCRSLQPLGLGGMDEM+D+DPLE GPDPDEILLQGEPELLRQQQ     EAELAAAEAATVAAGK PTKAELAEAAV   MASKT GEG GADEVAMAALGPKRKKR EKVR+DPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRA EVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPT+VHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFT PEQRFKQFP             PP FCRDAR SDYR
Sbjct:    1 MTRPATTSAASIAVVAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSSSRFAGPLQMTMPAPRQRQQRRQIFMPAGASST-LAGHQRRRTPSGGREEVSLPRPRRCRSLQPLGLGGMDEMDDIDPLEGGPDPDEILLQGEPELLRQQQXXXXXEAELAAAEAATVAAGKGPTKAELAEAAVXXXMASKTAGEGVGADEVAMAALGPKRKKRAEKVRVDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRATEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTVVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQFPX---------PPPPPYFCRDARSSDYR 386
[Close]
BLAST of mRNA_Ecto-sp13_S_contig924.20819.1 vs. uniprot
Match: D7G5D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D7_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 1.760e-151
Identity = 233/253 (92.09%), Postives = 235/253 (92.89%), Query Frame = 2 
Query:  551 MDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEAELAAAEAATVAAGKAPTKAELAEAAVAAAMASKTVGEGGGADEVAMAALGPKRKKRTEKVRIDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRAAEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTAPEQRFKQFPVL 1309
            MDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYE ELAAAEAATVAAGKAPTKAELAE             EGGGADE AMAALGPKRKKR EK RIDPLMPRGGVAPNEWLDMA+LAEGVRGILVVCHTGLPKDKKRAAE+MNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFT PEQRFKQFPVL
Sbjct:    1 MDEMEDMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEVELAAAEAATVAAGKAPTKAELAEXXXXXXXXXXXXREGGGADEAAMAALGPKRKKRVEKARIDPLMPRGGVAPNEWLDMADLAEGVRGILVVCHTGLPKDKKRAAEIMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQFPVL 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig924.20819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXG7_9PHAE1.730e-22988.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5D7_ECTSI1.760e-15192.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig924contigEcto-sp13_S_contig924:7143..13837 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2272
Hectar predicted targeting categorychloroplast
Exons5
Cds size1116
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig924.20819.1prot_Ecto-sp13_S_contig924.20819.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig924 8103..13641 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464194.964721-UTR-Ecto-sp13_S_contig924:7142..81021681464194.964721-UTR-Ecto-sp13_S_contig924:7142..8102Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig924 7143..8102 -
1681464195.025585-UTR-Ecto-sp13_S_contig924:13641..138371681464195.025585-UTR-Ecto-sp13_S_contig924:13641..13837Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig924 13642..13837 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464194.9741173-CDS-Ecto-sp13_S_contig924:8102..83871681464194.9741173-CDS-Ecto-sp13_S_contig924:8102..8387Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig924 8103..8387 -
1681464194.9830532-CDS-Ecto-sp13_S_contig924:9238..93281681464194.9830532-CDS-Ecto-sp13_S_contig924:9238..9328Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig924 9239..9328 -
1681464194.992035-CDS-Ecto-sp13_S_contig924:9651..98791681464194.992035-CDS-Ecto-sp13_S_contig924:9651..9879Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig924 9652..9879 -
1681464195.000724-CDS-Ecto-sp13_S_contig924:12545..129471681464195.000724-CDS-Ecto-sp13_S_contig924:12545..12947Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig924 12546..12947 -
1681464195.015981-CDS-Ecto-sp13_S_contig924:13530..136411681464195.015981-CDS-Ecto-sp13_S_contig924:13530..13641Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig924 13531..13641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig924.20819.1

>prot_Ecto-sp13_S_contig924.20819.1 ID=prot_Ecto-sp13_S_contig924.20819.1|Name=mRNA_Ecto-sp13_S_contig924.20819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp
MTPPATASAASIAVMAFTLLGSLLPTSSFVPLASRGQAPRQSSRRPPPSS
SRFAGPLQMTTPAYRQRQQRQQIFMPAGASSSNLAGHPRRRTPSGDREEV
SLPRPRRCRSLQPLGLGGMDEMEDMDPLEAGPDPDEILLQGEPELLRQQQ
EEEDYEAELAAAEAATVAAGKAPTKAELAEAAVAAAMASKTVGEGGGADE
VAMAALGPKRKKRTEKVRIDPLMPRGGVAPNEWLDMANLAEGVRGILVVC
HTGLPKDKKRAAEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFE
VWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINED
FQFRLPGFTAPEQRFKQFPVL*
back to top

mRNA from alignment at Ecto-sp13_S_contig924:7143..13837-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig924.20819.1 ID=mRNA_Ecto-sp13_S_contig924.20819.1|Name=mRNA_Ecto-sp13_S_contig924.20819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6695bp|location=Sequence derived from alignment at Ecto-sp13_S_contig924:7143..13837- (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGTTGCCGTGTGTACCGCTAGGGCTCTACCACACCACGCACGGCACTA
CCACGCACGACGTGACCTTCTCAACCTTGCCTAGTAGTTCTTCGGGACAT
CTTCTCCTCAGCTTCTCTTGTGTGGTGCAGAGAGCAAGGCAGGCTCTCCA
AACCTACTCGCCGTGTGGGTGTACGGTGTTAGGCGCAGCACACGCGATGA
CTCCACCTGCCACAGCATCAGCTGCTTCGATAGCGGTTATGGCCTTCACC
TTGCTAGGCTCGCTCTTGCCTACTTCGAGCTTTGTGCCGCTAGCTTCGAG
AGGTCAGGTGAGGCAACACGAAACGTGTACCGCAGTGCCCTCTGTATTGA
TCAGCGTTGTCTCAATCGCTAGTTGTTTAACAACCGTTCATGAGTCGATG
TCTCATGAAGTCAACTTGCACCATGTACAGAGTACTGCATGCCGAGTTTC
CTCCTCATTGGGATCATGAGTATCCCATACGGTTGGGAAGATGGGGGCAA
GAATTTTGCCCAGCAGATGCCTAGTTCAACAACACCCATAACAGCTGGAC
GTACGGCAGTAAATAGTTGACGCGTCTAGAAAACCTCTGGTATCTTGCAA
AGCGAAAGATAAAAAAAATCGGCGTCAAGTCCCATCACGGGGAGAACACG
GCGGAGGGAGGGAGAGGCCGAGAAATATGTCACTTTGTGTCACCGACTTG
TACGCGACATGGTTCTTGTAGCCTGCTTGCACATGACCAGCTGTGACGCA
GACTTGGTTAAGGGAGGCCAACCAACCGTGTCGAGCAATTTCCAGCGCCC
TCTGTAAAAAACGCTCCAGTGCAATGAGACTCGTCCACCCCACTTCATTC
CAACAGCAGTCACCGCTTTCTTTCATCTCCCCCCCGTCAGGCTCCCCGCC
AATCCAGTAGACGACCACCACCATCGTCTTCACGGTTCGCCGGGCCTCTT
CAGATGACAACCCCGGCTTACCGCCAAAGGCAACAACGGCAGCAGATCTT
CATGCCGGCAGGTGCTTCTTCCTCTAACCTTGCAGGCCATCCACGGCGAA
GAACACCGTCGGGGGACAGGGAGGAGGTTTCGTTGCCGCGCCCTCGTCGG
TGTCGTTCCCTGCAGCCGCTGGGCCTCGGCGGTATGGATGAGATGGAGGA
CATGGACCCTCTTGAGGCCGGGCCCGACCCGGACGAGATCCTGCTCCAGG
GAGAGCCGGAGCTGCTGAGGCAGCAGCAGGAGGAGGAGGACTACGAGGCG
GAGCTGGCGGCCGCGGAAGCGGCCACGGTGGCGGCGGGGAAGGTACTGTT
TGTTTGTAGACACAAACCTTTTTGTTTAGGGGGATTTCATGTAGAGAAAC
CAGTAGCCCAGTAGTCTACGCAGCAAAATTGATTAAGCAAACATATGGGA
TGAAGAATTCAATCCATGCTTTGGGGTTGGGGTTAGGGTTAGGGTTGGGG
ATAGGGTCTGCGTGCCCCCTCCTTATTCTTTTCTAGATACTCTTGAAGTA
GTCTTATCTACGATGCTGATGGTGCACGAATCCCGACACACACCAGCGTG
AATTGTTTGTGGTGCAGCTACGCGTGACTACAAAGGGACAGCAGGCGTGC
GACGGGAGCGACGATGATTGTATGTGCGGCCACCGTTGAAAATTTTGCAC
TCTACATGCGGTCGTTTCTTTCCGTTTTGATGCACATGCACGAAGAAACA
AACTGTCAAGTCTTCCTGCTGTGCGGACGCAAACAGACACACACGTACGT
ACATCTGGGCATCTGGAAGAAGCATACATGCGGCATCCCCCTGGCGGCGA
GCATGTCACATGTCACACCGTCGAGGAACACGACCAGCAGAGCAGACATA
GGATTGTGGGGAGACCCTACTTGCAGGATGGTCCTGTAACGAAATGCTGC
AGGATGGAAAACGCCTCCAGAATCAACCCACCATAAACCCAGAACCAAGC
AGCAAACCAAGACACACAGAAACACAGTGAAACACAGACACCTGCTCCAC
AGACCACACGAAACCAGCACGAAACACACAGCCCACAACCGGGCAGACTA
CACGCAGCCCACACAGCAGACATACAAGGTTGCACTTGGGGATGTACCTC
TCTCTGTCTCCGCCCCGTGATGCTGACATGCTGACTTCCAGTTCCAGTTC
TTACCTCACATAGCGTGTAGAGAGACACATAGTCTGGAGCCCTCTGCCTG
CTGCTCCCTCTCTCTGTGCGCGTGGGTGTGATTTCGTCCTACTCTTTATT
ATAGCGACAGTCCCTCCATTTTTCGCGGTGAGACGTGTCCTACTGTACAC
TTTCAGTGTGTGTAGAGTAGTACACTTTTTCAGTGTATTTTTGCGTACAA
CTACAACACTACACATGTACAACTTGGTACAACCCACGCAGGGTCACACA
GGAGGGGGGTAAACATCGACACGCTGATAATGTGTCTCTCTACACGCTAT
GTGAGGTAAGAACTGGAACTGGAAGTCAGCATGTCAGCATCACGGGGCGG
AGACAGAGAGAGGTACATCCCCAAGTTCAACCCTGTATGTCTGCTGTGTG
GGCTGTGTGTAGTCTGCCCGGTTGTGGGCTGTGTGTTTCGTGCTGGTTTC
GTGTGGTCTGTGGAGCAGGTGTCTGTGTTTCACTGTGTTTCTGTGTGTCT
TGGTTTGCTGCTTGGTTCTGGGTTTATGGTGGGTTGATTCTGGATGCGTT
TTCCATCCTGCAGCATTTCGTTGCAGGACCATCCTGCAAATAGGGTCTCA
CTGTGACATGAGGAATGGCAAATATTGCGTCAGGCTCACAACTTGCCCGC
CACATTCGTCTCAAGCCGTGCGAGTTTCCCGCCCAAGTGAACGCAAGTAG
ACCAGCATGAACCAAAAACAACAAAAAAACGATGATGGCCATACGACGTC
ATGACTTTGATGCGAGAGGCCGAGAGGCCCTGCTGGGCTGCAGCAGCGAC
AACAGTCTACAGGGCACGGCTTTCATGAAGACAGTCAGTAGCGCGGCGCA
AGTACGAAATCTTAACCGATCCAGCGGGTAACCATCCTCATAATGCACAG
CAGCAACAGCAGTAGACCGTCACGTCCTCGACGGATTCTCTCGATGATGG
TAGGTGTGATCTGGACTTGGGAAGGTGTGTTATTTGTGTGATGATTGGTC
TGCTCTTTTTGAAGCAGTTGGTCGGACCCACTCAACATAATCCATTCCCG
CCAGGTTACACATGACCCATGCCTACAGTATACCAACGGTGCACAGGTCG
TATGGGCCCGGCCCCTCTTGGTTTTCAGAGCTGGTCTCAGACCAGCGTCT
CAGCGGTGATGCGTTCGTTGGTGGTGTTCTTGCGTCTCTGTCGGTGTTTC
TTGCCCTGGTCTGAATCGCGCGCGCCCGCGATCTTCGCTGCTGTGCACGC
CTGTTCGCGTAGAAACCCCGGGGTTGGGGAGCACAATCTCTATGGAATAT
AGGCTACATGTGCCGGTGAAGCAAAGCCATCTGCTCTCGGAGCACGACGA
AACCGGTGTGGAGAAGAGCGCGCTATTTTTCGTCTTCCTCACAAGCGAGC
AGATCGTCAATCGTCAATCGGTGCCCTATAGATCTCGTTCTGGTTCCAAA
GGCGTGCTTTAAAAGCTTCCCCGTAATCATGTTTTGGGGGCCCTGTTTCG
CGGGGTGCAACTTTCGCCGATACATAGAGCCTTTTTTGCCCTCCTGGGGA
CGAAGGGAAAAATGTCGCTCGCTTCGCTCGCTCCGCGGCTCATTAAAATC
CTGCGTAGGCGGTCCGACGAGAGAGAGAGGACCTCTTCAGAACCCCAGCG
CAAAGAATTTCGCAGAAGCGCGCACGGGTGTAAACAAGTGCGCTCGCTAA
AAAAATGAAAACGGCAGCATCACGGGCTGGAACATGTGCTGGTATGTTGT
AATGAGTGTCGTGTCCCCTCGTTGTGTTCGGGCTGCCTCTCGTTTCTCGA
CAACGAAGGCGCCAACCAAGGCGGAGTTAGCGGAGGCGGCGGTCGCGGCG
GCGATGGCGTCCAAGACGGTGGGGGAGGGCGGGGGGGCAGACGAGGTGGC
TATGGCCGCGCTAGGGCCCAAGAGAAAGAAGAGAACAGAGAAAGTGCGGA
TCGACCCGCTCATGCCCAGGGGCGGCGTCGCGCCGAACGAGTGGCTGGAC
ATGGCGAACCTGGCGGAGGGGGTGCGGGGGATCTTGGTAAGGCGAAGATG
ATGCCGACAATGCTTACGTGTTTCAGGGGGGGGGGGAAGAGACGTTGCCG
TTACGCTCCTTGCCATCCGTTACGAATGCCGGGAGACCGCAGGAGTGTGT
TTTGTTTTTCATGAACATTCAGTTGGCTTCTTCGATCGTTAGTCTCCCAA
ACGCTTTTTCTGCGTGTTCGTTTTGTTGTTGGTTTGCTGATACATACCGC
CATCTACTTTTTCGGTTGACCCCGCTCACCCACGTCAAAACCTGAATCCG
TGTCCGGTCAAGAGTTTGATACGATACATTCACCCTCTTTTCCGATGGCT
TCCAACCAGGTGGTGTGCCACACGGGCTTGCCGAAAGACAAGAAGAGGGC
CGCTGAGGTCATGAACGCCGTCAAGGAGCGCTATGGTCACGTTATTCACG
TGAGTCGAGTCCATGGGCAACCGACGGCCGGCCTTTGGTTGCTTTTTTTT
TTTTTAACAATTTTCCCACCAAGTGCCGTCGCTCGCATCATGTACCGTGT
GGTCTGGCCTTCTCTTCTGCTGAGTCACTATCTGAGGGCACACAGATGGG
ATTCCTGAAGTGGTTGATGCCTTCAATTTTTGGTGGCGAGAGACAGGTTC
AGCGATCCTTGAGGCATCTTCAATAACCAAGTTTGTAAACGGACCACACC
CCGGTGACTCGGGTGTTTCGTGCTCTGTCTGGTCGTCCTTCGTTTTGCGG
TCAGCACACGCACTTCGGTCTTACGAGTCCCCTACAGCTTAGCCTCACAA
GGAGCTGTAATCTGGATGTACAGTTTTCAAGTGCTGCATATCTCAACCCG
ACGTGTGCAGTTGAAGTTCGTTCGTTTTCTACTACCGCTACTGCCGCTGG
AGGTTGGGTTTGTATATGTACAGGAGTGTTTTCATGGGCGAAGTTTGTCT
TTTCTGCTCCACATCGTGTGTTGAGGGGAGCGGAGGGCCCTCGACTGCCT
TTCTTTGATTTGAATTGGCTTGCGGACGGTTCGGGTCCAAATGATTTAAG
TATAACTTTCGTAAGGGGTGAGTTAGCCTGTTACCACGGGAATCGACACC
GTCAAGCGTTTTACCAGTACGGGCAGATGAAGGTACTGGGTAGAGAGATC
GGAACGGTCGTAATAGGAAGACAACCCAACGTGTGCAGATGAAGTTGCGC
TTTGATCTTCCACTAAACGAGGCTGCTGCTGCTGCTGCGTACCCTTAAAA
ACAATACATACCCTGTATGAAATTTTAAACAATGTAACGGCTGACAACAG
ACGCACGAATGGTGGGACGACGACGAGGAGCTGACGGACGACGACCGTGA
GGATGCCGGCACCTTCGAGGTCTGGCTCGAGGGGCCCACCATCGTCCACT
ACCACGAGAGGGCCGACGGCAAGCTGGACCTGGACGACGAGCAGCTGGAC
AAGATCCTCGATGACCTCGAGGAACGCGTGATGGACGAGGCCATCCTCGG
GCAGTACATCAACGAGGACTTCCAGTTCCGGCTGCCCGGGTTCACGGCCC
CCGAGCAGCGGTTCAAGCAGTTCCCCGTCCTGTAATTTTATTTGCGGGGT
GCGTCAACCTTGCTCCCCCCCTCTTTTTGTAGGGATGCGAGGTAGAGCGA
CTACCGCTATGAGTACAAAACACACATAGCCTGTGATTCGGGAGGGGGGT
AGAAGAGCACAAGCGTTGGCGGTGTCTTGTTGTTTCATCCTGGCTCTTGT
TCGGATGCGGGGGGTCGAAGAGCCCAAATTGAGCTCCCGGCCATGGGTAG
TGGGAGCATCCCTATCCGGAGGAGACTTATTGCCGTCCGCCGCTCGGGTT
TTTTGCCCCAGGGTACAGCGAAATTAGGGTGAAAATGAGTTCCCCGTCGT
GAAGTGTAACGTGCCGTGAAGCGTGTGTTGGTGTGGGTAGATGCTGATGA
AACGGGCCACTACTGCTGTTCTCCATCCTGAGGTTGTCGAGATGTTCTCG
ACCGAGTTACCTCGGTGTCGACAGCAGGAGAGGACCAGCGGCGAAACGGA
AAAAGCACTGGTCACCTCTACCTTTTTTTGTTGCATTTGTGGGAGCACTA
CTTGTGATTCTTGCCAAAAGTAATTATTGCCACCCCTTTCTCCGTTGTTG
AGCCCATCGAGTGGGGAATGTCGACCTCGGGCTTGTGGTGTTTTCCGTGA
TGCGCGGTATTGAGCAGAACAGCGCACGCACCAGAGCGAGCGAGAGAGAG
AGCGTATGGAAAAGCGTGAGTGGCTTGTGCGATACCGCGCGACGTAACAT
CGTAGGGCTGACGGCAGAAATATTTGCCATTGGTGCGCCTTGCCGAAGTG
ACGCGATAGCGGGATGATGTTACCACGGGGTGAACTGCTGCTGCTTGTGA
CGACGACCAATATGTTGTCAATGGAGGGATCTTCGAATCTTTGGTGGCTC
TCGTTCGTGCTCAATGTAAGTTGTTCCGGTTGGAGATGGTGAGTGCCACC
ATGTTCTGCGACAAGGCAGTCAGAGAAAGACAAACAACGCGGAGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig924:7143..13837-

>mRNA_Ecto-sp13_S_contig924.20819.1 ID=mRNA_Ecto-sp13_S_contig924.20819.1|Name=mRNA_Ecto-sp13_S_contig924.20819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1116bp|location=Sequence derived from alignment at Ecto-sp13_S_contig924:7143..13837- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACTCCACCTGCCACAGCATCAGCTGCTTCGATAGCGGTTATGGCCTT
CACCTTGCTAGGCTCGCTCTTGCCTACTTCGAGCTTTGTGCCGCTAGCTT
CGAGAGGTCAGGCTCCCCGCCAATCCAGTAGACGACCACCACCATCGTCT
TCACGGTTCGCCGGGCCTCTTCAGATGACAACCCCGGCTTACCGCCAAAG
GCAACAACGGCAGCAGATCTTCATGCCGGCAGGTGCTTCTTCCTCTAACC
TTGCAGGCCATCCACGGCGAAGAACACCGTCGGGGGACAGGGAGGAGGTT
TCGTTGCCGCGCCCTCGTCGGTGTCGTTCCCTGCAGCCGCTGGGCCTCGG
CGGTATGGATGAGATGGAGGACATGGACCCTCTTGAGGCCGGGCCCGACC
CGGACGAGATCCTGCTCCAGGGAGAGCCGGAGCTGCTGAGGCAGCAGCAG
GAGGAGGAGGACTACGAGGCGGAGCTGGCGGCCGCGGAAGCGGCCACGGT
GGCGGCGGGGAAGGCGCCAACCAAGGCGGAGTTAGCGGAGGCGGCGGTCG
CGGCGGCGATGGCGTCCAAGACGGTGGGGGAGGGCGGGGGGGCAGACGAG
GTGGCTATGGCCGCGCTAGGGCCCAAGAGAAAGAAGAGAACAGAGAAAGT
GCGGATCGACCCGCTCATGCCCAGGGGCGGCGTCGCGCCGAACGAGTGGC
TGGACATGGCGAACCTGGCGGAGGGGGTGCGGGGGATCTTGGTGGTGTGC
CACACGGGCTTGCCGAAAGACAAGAAGAGGGCCGCTGAGGTCATGAACGC
CGTCAAGGAGCGCTATGGTCACGTTATTCACACGCACGAATGGTGGGACG
ACGACGAGGAGCTGACGGACGACGACCGTGAGGATGCCGGCACCTTCGAG
GTCTGGCTCGAGGGGCCCACCATCGTCCACTACCACGAGAGGGCCGACGG
CAAGCTGGACCTGGACGACGAGCAGCTGGACAAGATCCTCGATGACCTCG
AGGAACGCGTGATGGACGAGGCCATCCTCGGGCAGTACATCAACGAGGAC
TTCCAGTTCCGGCTGCCCGGGTTCACGGCCCCCGAGCAGCGGTTCAAGCA
GTTCCCCGTCCTGTAA
back to top