prot_Ecto-sp13_S_contig9182.20759.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9182.20759.1
Unique Nameprot_Ecto-sp13_S_contig9182.20759.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9182.20759.1 vs. uniprot
Match: D7G3D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D0_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 9.900e-93
Identity = 153/189 (80.95%), Postives = 159/189 (84.13%), Query Frame = 0 
Query:    1 GSSRSSATSCSRKIARTSALVDVVRKSSGVSVGASLSTPATAAPLAT---GRLLRIHAAPDEGSGATTLSTMVAAAAAAVALL-CAQRELQPRWEEDGVCLCKGKASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE 185
            GSSR SA SC+RKI RTSALV+ VR+SSG SVGA LST +TA+         LL I  APDEGSGATTLSTMV           CAQ+ELQPRWEEDGVCLCKGKASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE
Sbjct:    5 GSSRPSAASCNRKIGRTSALVNAVRRSSGFSVGAPLSTRSTASXXXXXXXSSLLGIRTAPDEGSGATTLSTMVXXXXXXXXXXXCAQQELQPRWEEDGVCLCKGKASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE 193
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BLAST of mRNA_Ecto-sp13_S_contig9182.20759.1 vs. uniprot
Match: A0A6H5L3M7_9PHAE (EF-hand domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M7_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 1.780e-68
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0 
Query:   73 AAAAVALLCAQRELQPRWEEDGVCLCKGKASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE 185
            A AA ALLCAQ+ELQPRWEED VCLCKGK SA DSLEDYARRLQRLRSLRDIFEEYATV+ADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDH LISFDE
Sbjct:    3 AVAAAALLCAQQELQPRWEEDCVCLCKGKTSATDSLEDYARRLQRLRSLRDIFEEYATVDADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHSLISFDE 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9182.20759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3D0_ECTSI9.900e-9380.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3M7_9PHAE1.780e-6892.92EF-hand domain-containing protein (Fragment) n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9182contigEcto-sp13_S_contig9182:4155..5667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9182.20759.1mRNA_Ecto-sp13_S_contig9182.20759.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9182 4155..5667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9182.20759.1 ID=prot_Ecto-sp13_S_contig9182.20759.1|Name=mRNA_Ecto-sp13_S_contig9182.20759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
GSSRSSATSCSRKIARTSALVDVVRKSSGVSVGASLSTPATAAPLATGRL
LRIHAAPDEGSGATTLSTMVAAAAAAVALLCAQRELQPRWEEDGVCLCKG
KASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAML
CYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE
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