prot_Ecto-sp13_S_contig9180.20753.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9180.20753.1
Unique Nameprot_Ecto-sp13_S_contig9180.20753.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9180.20753.1 vs. uniprot
Match: D7G1B9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.170e-19
Identity = 90/126 (71.43%), Postives = 91/126 (72.22%), Query Frame = 0 
Query:   23 SSVRPRGALSGSGGGSRSGTHAKAGGDXSAQNGENXXXXXXXXXXXXXXXXXXXXXX--SGSVATPATPP-TGKRQXXXXXXXXXXXXXXXXXXXXXXXXKXXXSKKTAKQRGEKASEDNRPSGAK 145
            SSVR RGAL GSGGGSRSGTHAKAGGD SAQNGEN XXXXXXXXXXXXXXXXXXXX   SGSVATPATPP TGKRQ                        K   SKKTAKQRGEKASED+RPSGAK
Sbjct:  186 SSVRLRGALPGSGGGSRSGTHAKAGGDGSAQNGENTXXXXXXXXXXXXXXXXXXXXSTASGSVATPATPPPTGKRQRHGKAKRTGASVEDEDAEEEDPTSKPKKSKKTAKQRGEKASEDHRPSGAK 311
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BLAST of mRNA_Ecto-sp13_S_contig9180.20753.1 vs. uniprot
Match: D7G4P2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P2_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.320e-8
Identity = 52/72 (72.22%), Postives = 53/72 (73.61%), Query Frame = 0 
Query:   25 VRPRGALSGSGGGSRSGTHAKAGGDXSAQNGENXXXXXXXXXXXXXXXXXXXXXX-SGSVATPATPPTGKRQ 95
            VRPRGAL GSGG  RSGTHAKAG  X +QNGEN   XXXXXXXXXX          SGSVATPATPPTGKRQ
Sbjct:   46 VRPRGALFGSGGXXRSGTHAKAGXXXXSQNGENTGEXXXXXXXXXXKGKQRGASTASGSVATPATPPTGKRQ 117
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9180.20753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1B9_ECTSI2.170e-1971.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4P2_ECTSI1.320e-872.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9180contigEcto-sp13_S_contig9180:794..2600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9180.20753.1mRNA_Ecto-sp13_S_contig9180.20753.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9180 793..2600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9180.20753.1 ID=prot_Ecto-sp13_S_contig9180.20753.1|Name=mRNA_Ecto-sp13_S_contig9180.20753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
KGDEGGGDSQQHDESAAPPGGGSSVRPRGALSGSGGGSRSGTHAKAGGDG
SAQNGENTGEGSGLGKGKGKGKRRGASAASGSVATPATPPTGKRQRQGKA
KGTRVSAEDEDAEEEDPTSKPKKSKKTAKQRGEKASEDNRPSGAKQKGKK
KTKSTKARQQQEKGSADPSKAKAKSKSKGKKKARQQEDEDSDDNDP
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