prot_Ecto-sp13_S_contig9174.20745.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9174.20745.1
Unique Nameprot_Ecto-sp13_S_contig9174.20745.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
BLAST of mRNA_Ecto-sp13_S_contig9174.20745.1 vs. uniprot
Match: A0A6H5K3D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D8_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.420e-69
Identity = 138/161 (85.71%), Postives = 143/161 (88.82%), Query Frame = 0
Query:    3 GSTDEDIEVQLQRQDEIAKRIREREARLSVEARAATTRDLLLSVNDGDDDREETCKECKQHFDDDTDMMTCSSCEESWHRECTNDPECNNIDTMTAKKARAR-----DGDISGDDDSGGRXXXXXXXXGSDSDSTKSAKTRASRSPHIDLVEAKREEDRDI 158
            GS DEDIEVQLQRQDEIAKRIREREA++S EARAATTRDLLLSVND  DDREE CKECKQHFDDDTDMMTCS CEE WHRECT+DP+CNNIDTM AKKARAR     DGDISGDDDSGG XXXXXXXX    DSTKSAKTRASRSPHIDLVEAKREEDR+I
Sbjct:  385 GSIDEDIEVQLQRQDEIAKRIREREAQISAEARAATTRDLLLSVNDSGDDREEKCKECKQHFDDDTDMMTCSRCEECWHRECTDDPQCNNIDTMRAKKARARWGIEADGDISGDDDSGGXXXXXXXXXXXXXDSTKSAKTRASRSPHIDLVEAKREEDREI 545          
BLAST of mRNA_Ecto-sp13_S_contig9174.20745.1 vs. uniprot
Match: D8LMU9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU9_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.280e-32
Identity = 92/179 (51.40%), Postives = 112/179 (62.57%), Query Frame = 0
Query:    2 SGSTDEDIEVQLQRQDEIAKRIREREARLSVEARAATTRDLLLSVNDGDDDREETCKECKQHFDDDTDMMTCSSCEESWHRECTNDPECNNIDTMTAKKARARDGDISGDDDSGGRXXXXXXXXGSDSDSTKSAKTR------ASRSPHIDLVEAKREEDRDIIERTWTPNVRSPKRKK 174
            +G + E+I +Q+QRQDEIAK IREREA+LSVEARAATTRDLL + +DG+ + EE C EC QHFDDD DMM CS CE  WHR+C + P C++ +T    K      D  GDD     XXXXXXXX                   ASRSP+IDLVEAK EEDR++I+          K+KK
Sbjct:   27 NGYSAEEINLQIQRQDEIAKMIREREAQLSVEARAATTRDLLWAGSDGEGEDEEMCTECGQHFDDDDDMMRCSGCEGCWHRDCADGPVCDDSETWLCSKCFVPGEDSGGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRSPYIDLVEAKEEEDREVIKANIDAQRELAKKKK 205          
BLAST of mRNA_Ecto-sp13_S_contig9174.20745.1 vs. uniprot
Match: A0A6H5JX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX39_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.440e-31
Identity = 92/213 (43.19%), Postives = 119/213 (55.87%), Query Frame = 0
Query:    2 SGSTDEDIEVQLQRQDEIAKRIREREARLSVEARAATTRDLLLSVNDGDDDREETCKECKQHFDDDTDMMTCSSCEESWHRECTNDPECNNIDTMTAKK---------------------------ARARDGDIS-------------GDDDSGGRXXXXXXXXGSDSDSTKSAKTRASRSPHIDLVEAKREEDRDIIERTWTPNVRSPKRKK 174
            +G   E+I++Q+QRQ +IA+ IREREA+LSVEARAATTRDLL + NDGD + EE C EC Q+FDDD DMM CS CE  WHR+C +DP C++ +T+  +                             R R+                 G DDS         XX SDS   KSAK+RASRSP+IDLV+AK +EDR++I+          K+KK
Sbjct:  458 NGYPVEEIKLQIQRQYKIARMIREREAQLSVEARAATTRDLLRAGNDGDGEHEEVCTECGQNFDDDDDMMRCSGCEGCWHRDCVDDPACDDGETVEIQSMDTTHNLLAFFCFSDVRSGCAQNALSPGRTREATTGVVAETNTVAHSGGGGDDS--------EXXASDSGXXKSAKSRASRSPYIDLVQAKEKEDREVIKANIDAQRELAKKKK 662          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9174.20745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K3D8_9PHAE2.420e-6985.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMU9_ECTSI3.280e-3251.40PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JX39_9PHAE1.440e-3143.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..101
e-value: 4.0E-6
score: 28.9
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 35..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9174contigEcto-sp13_S_contig9174:916..1649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9174.20745.1mRNA_Ecto-sp13_S_contig9174.20745.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9174 62..1724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9174.20745.1 ID=prot_Ecto-sp13_S_contig9174.20745.1|Name=mRNA_Ecto-sp13_S_contig9174.20745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MSGSTDEDIEVQLQRQDEIAKRIREREARLSVEARAATTRDLLLSVNDGD
DDREETCKECKQHFDDDTDMMTCSSCEESWHRECTNDPECNNIDTMTAKK
ARARDGDISGDDDSGGREGDASGDEGSDSDSTKSAKTRASRSPHIDLVEA
KREEDRDIIERTWTPNVRSPKRKKRTGRSRILAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD