prot_Ecto-sp13_S_contig91198.20677.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91198.20677.1
Unique Nameprot_Ecto-sp13_S_contig91198.20677.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig91198.20677.1 vs. uniprot
Match: D8LIL7_ECTSI (Protein phosphatase 1, regulatory subunit, and related proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL7_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.300e-16
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 QGNPVCREVEYRFTVLAYIKNIAYHDYGTVDPAEVLQVR 39
            +GNPVCREVEYRFTVLAYIKNI YHDYGTVDPAEVLQ +
Sbjct:  168 EGNPVCREVEYRFTVLAYIKNITYHDYGTVDPAEVLQAK 206          
BLAST of mRNA_Ecto-sp13_S_contig91198.20677.1 vs. uniprot
Match: A0A835Z751_9STRA (Protein phosphatase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z751_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.560e-9
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 QGNPVCREVEYRFTVLAYIKNIAYHDYGTVDPAEVLQVR 39
            +GNPVC+E +YRFT LAY+K + +HDY  VDP+EV Q R
Sbjct:  170 EGNPVCKEADYRFTALAYLKAMKFHDYTMVDPSEVEQAR 208          
BLAST of mRNA_Ecto-sp13_S_contig91198.20677.1 vs. uniprot
Match: A0A7S2UTU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTU5_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.790e-9
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 QGNPVCREVEYRFTVLAYIKNIAYHDYGTVDPAEVLQVR 39
            +GNPVCRE EYR T LAY++ + Y DY  VDPAEV Q R
Sbjct:   42 EGNPVCREPEYRATALAYVETLKYFDYAMVDPAEVTQSR 80          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91198.20677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LIL7_ECTSI2.300e-1689.74Protein phosphatase 1, regulatory subunit, and rel... [more]
A0A835Z751_9STRA3.560e-961.54Protein phosphatase 1 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2UTU5_9STRA4.790e-964.10Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91198contigEcto-sp13_S_contig91198:120..260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91198.20677.1mRNA_Ecto-sp13_S_contig91198.20677.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91198 120..260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91198.20677.1 ID=prot_Ecto-sp13_S_contig91198.20677.1|Name=mRNA_Ecto-sp13_S_contig91198.20677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
QGNPVCREVEYRFTVLAYIKNIAYHDYGTVDPAEVLQVRWCAANFH*
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