prot_Ecto-sp13_S_contig9098.20649.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9098.20649.1
Unique Name	prot_Ecto-sp13_S_contig9098.20649.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	293

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9098.20649.1 vs. uniprot
Match: D8LKN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN4_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 2.790e-64
Identity = 236/290 (81.38%), Postives = 238/290 (82.07%), Query Frame = 0

Query:    4 ASLEGRLEEAVEETSRLRQELTVAISGSTASQEGAAEAVAKAEGERAALEAQVAGQKDKLKKAAARLRSLKEERDAASEKVASTAALLETSEKKLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATSRLREAEDLLRSTSEESMVLRQGLEERCQRLEESAARAPALEADLAAERSSRREXXXXXXXXXXXXXXXXXXXXXTARESEEIMGALQGQVDAANKERDTAVAGLEAAEQEKESSKTRLKDLFAKYKAVQAVRGRERV 293
            ASLEGRLEEA EETSRLRQELT AISGSTASQEGAAEAVAKAEGERAALE QVAGQKDKLKKAAARLRSLKEERDAA+EKVA T+ALLETSEK LAD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SRLREAEDLLRSTSEESMVLRQGLEERCQRLEESAARAPALEADLAAERS RRE XXXXXXXXXXXXXXXXXXXX                                     ESSKTRLKDLFAKYKAVQAVRGRE V
Sbjct:  757 ASLEGRLEEAAEETSRLRQELTAAISGSTASQEGAAEAVAKAEGERAALEEQVAGQKDKLKKAAARLRSLKEERDAATEKVAFTSALLETSEKNLADAEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLREAEDLLRSTSEESMVLRQGLEERCQRLEESAARAPALEADLAAERSGRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSKTRLKDLFAKYKAVQAVRGRESV 1046

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9098.20649.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.260e-62
Identity = 222/282 (78.72%), Postives = 224/282 (79.43%), Query Frame = 0

Query:    4 ASLEGRLEEAVEETSRLRQELTVAISGSTASQEGAAEAVAKAEGERAALEAQVAGQKDKLKKAAARLRSLKEERDAASEKVASTAALLETSEKKLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATSRLREAEDLLRSTSEESMVLRQGLEERCQRLEESAARAPALEADLAAERSSRREXXXXXXXXXXXXXXXXXXXXXTARESEEIMGALQGQVDAANKERDTAVAGLEAAEQEKESSKTRLKDLFAKYKAVQ 285
            ASLEGRL            ELT AISGSTASQEGAAEAVAKAEGERAALE QVAGQKDKLKKAAARLRSLKEERDAA+EKVASTAALLETSEK LAD              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAT RLREAEDLLRSTSEESMVLR+GLEERCQRLEESAARAPALEADLAAERS RRE XXXXXXXXXXXXXXXXXXXX        MGALQGQVDAAN                  SSKTRLKDLFAKYKAVQ
Sbjct:  810 ASLEGRLXXXXXXXXXXXXELTAAISGSTASQEGAAEAVAKAEGERAALEEQVAGQKDKLKKAAARLRSLKEERDAATEKVASTAALLETSEKNLADAEARSRSLEEAIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATCRLREAEDLLRSTSEESMVLRRGLEERCQRLEESAARAPALEADLAAERSGRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGALQGQVDAANXXXXXXXXXXXXXXXXXXSSKTRLKDLFAKYKAVQ 1091

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9098.20649.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9098.20649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LKN4_ECTSI	2.790e-64	81.38	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KSR4_9PHAE	1.260e-62	78.72	GRIP domain-containing protein n=1 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 200..227
None	No IPR available	COILS	Coil	Coil	coord: 232..280
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	COILS	Coil	Coil	coord: 123..171
None	No IPR available	COILS	Coil	Coil	coord: 35..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9098	contig	Ecto-sp13_S_contig9098:2109..6277 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9098.20649.1	mRNA_Ecto-sp13_S_contig9098.20649.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9098 2109..6277 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9098.20649.1 ID=prot_Ecto-sp13_S_contig9098.20649.1|Name=mRNA_Ecto-sp13_S_contig9098.20649.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MFQASLEGRLEEAVEETSRLRQELTVAISGSTASQEGAAEAVAKAEGERA
ALEAQVAGQKDKLKKAAARLRSLKEERDAASEKVASTAALLETSEKKLAD
AEARSRSLEEAAGGEEQAAAAAVRDAEGRAAASAEALAALEQEASGLREE
LANATSRLREAEDLLRSTSEESMVLRQGLEERCQRLEESAARAPALEADL
AAERSSRRELEVELESLKAGARELESLKEGTARESEEIMGALQGQVDAAN
KERDTAVAGLEAAEQEKESSKTRLKDLFAKYKAVQAVRGRERV