prot_Ecto-sp13_S_contig9062.20624.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9062.20624.1
Unique Nameprot_Ecto-sp13_S_contig9062.20624.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length143
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9062.20624.1 vs. uniprot
Match: A0A6H5K8I5_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I5_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.420e-25
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0 
Query:    1 MRAPSTAGAEADALDDTGYDFANPMVKEIIILLRRQWINVVRTPELAVVRVVMCSVVAL 59
            MRAPSTAG EADAL+DTGYD+ANPM+ EIIILLRRQWINVVRTPELAVVRVVMCSVVAL
Sbjct:  350 MRAPSTAGVEADALEDTGYDYANPMLNEIIILLRRQWINVVRTPELAVVRVVMCSVVAL 408
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BLAST of mRNA_Ecto-sp13_S_contig9062.20624.1 vs. uniprot
Match: D7FP97_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP97_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.370e-24
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 0 
Query:    1 MRAPSTAGAEADALDDTGYDFANPMVKEIIILLRRQWINVVRTPELAVVRVVMCSVVAL 59
            MRAPSTAGAEADAL+DT +DFANPM+KEIIILLRRQWINVVRTPELAVVRVVMCSVVAL
Sbjct:  367 MRAPSTAGAEADALNDTAHDFANPMLKEIIILLRRQWINVVRTPELAVVRVVMCSVVAL 425
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9062.20624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8I5_9PHAE5.420e-2591.53ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FP97_ECTSI1.370e-2493.22ABC transporter domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9062contigEcto-sp13_S_contig9062:1009..5637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9062.20624.1mRNA_Ecto-sp13_S_contig9062.20624.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9062 408..6522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9062.20624.1 ID=prot_Ecto-sp13_S_contig9062.20624.1|Name=mRNA_Ecto-sp13_S_contig9062.20624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
MRAPSTAGAEADALDDTGYDFANPMVKEIIILLRRQWINVVRTPELAVVR
VVMCSVVALXXXXPTQMPRGLEAVRLTSRSRVLCSSSPLWRLCRSSWRSG
PSTPASTAEGPTASYPTCCATSSSTSPCAWSCRWPSPPSPTS*
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