prot_Ecto-sp13_S_contig906.20616.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig906.20616.1
Unique Nameprot_Ecto-sp13_S_contig906.20616.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length314
Homology
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BLAST of mRNA_Ecto-sp13_S_contig906.20616.1 vs. uniprot
Match: D7FWW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW0_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 2.720e-128
Identity = 247/285 (86.67%), Postives = 251/285 (88.07%), Query Frame = 0 
Query:    4 MPGLVDQDYASQHPQSQAPLDSNGPQQSIYRSSVASAEGERVPMLPGXXXXXXXXXXXXXXXXXXVRGTPGQGEEEDDGSGXXXXXXXXSAGKTMDASAEGAAAEGDFGDGDMVSG-LSDRSGRSTFQRSRDQGDHASDIHPGEGADEYVIRRSGSGNRPARSSNGTANGTGXXXXXXXXXXXXXXXXXXXXXXXXXXED---LDMPELATPRDGEDGDMSFYDGNSRLEEEVVDNFADIPTPAPRGAGARGSGAVAGADGRTFRTQRSNSSEGWVDQYTSSSLV 284
            MPGLVDQDYASQHPQSQAPLDSNGP QSIYRSSVASAEGERVPMLPG                  VRGTPG GEE+DDGS XXXXXXXXSAGKTMDASAEGAAAEG FGDGDMVSG +SDRSGRST QRSRDQGDHASDIHPGEGADEY IRRSGSGNRP R SNG ANGTGXXXXXXXXXXXXXXXXXXXXXXXXXX     +D+PELATPRDGEDGDMSFYDGNSRLEEEVVDNFADIPTPAPRGAG RGSGAVAGADGRTFRTQRSNSSEGWVDQYTSSSLV
Sbjct:    1 MPGLVDQDYASQHPQSQAPLDSNGPPQSIYRSSVASAEGERVPMLPGGAQSSLVSTAIVAADAMRVRGTPG-GEEDDDGSXXXXXXXXXSAGKTMDASAEGAAAEGGFGDGDMVSGGVSDRSGRSTRQRSRDQGDHASDIHPGEGADEYAIRRSGSGNRPTRFSNGMANGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDIPELATPRDGEDGDMSFYDGNSRLEEEVVDNFADIPTPAPRGAGGRGSGAVAGADGRTFRTQRSNSSEGWVDQYTSSSLV 284
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BLAST of mRNA_Ecto-sp13_S_contig906.20616.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE)

HSP 1 Score: 383 bits (984), Expect = 3.890e-120
Identity = 239/284 (84.15%), Postives = 243/284 (85.56%), Query Frame = 0 
Query:    1 MGSMPGLVDQDYASQHPQSQAPLDSNGPQQSIYRSSVASAEGERVPMLPGXXXXXXXXXXXXXXXXXXVRGTPGQGEEEDDGSGXXXXXXXXSAGKTMDASAEGAAAEGDFGDGDMVSGLSDRSGRSTFQRSRDQGDHASDIHPGEGADEYVIRRSGSGNRPARSSNGTANGTGXXXXXXXXXXXXXXXXXXXXXXXXXXEDLDMPELATPRDGEDGDMSFYDGNSRLEEEVVDNFADIPTPAPRGAGARGSGAVAGADGRTFRTQRSNSSEGWVDQYTSSSLV 284
            MGSMPGLVDQDYASQHPQSQAPLDSNGPQQSIYRSSVASAEGERVPMLPG                  VR T  +GEE      XXXXXXXXSAGKTMDASAEGAAAEGDFGDGDMVSGLSDRSGRST QRSRDQGD ASDIHPGEGADEY IR+SGSGNRP R SNG ANGTGXXXXXXXXXXXXXXXXXXX       ED+DMPELATPRDGEDGDMSFYDGNSRLEEEV+DNFADIPTPAPRGAGARGS AVAGADGRTFRTQRSNSSEGWVDQYTSSSLV
Sbjct:  980 MGSMPGLVDQDYASQHPQSQAPLDSNGPQQSIYRSSVASAEGERVPMLPGGAQSSLVSTAIVAADAMRVRETRVRGEEXXXXXXXXXXXXXXSAGKTMDASAEGAAAEGDFGDGDMVSGLSDRSGRSTLQRSRDQGDQASDIHPGEGADEYAIRQSGSGNRPTRFSNGMANGTGXXXXXXXXXXXXXXXXXXXARGGGREEDIDMPELATPRDGEDGDMSFYDGNSRLEEEVLDNFADIPTPAPRGAGARGSEAVAGADGRTFRTQRSNSSEGWVDQYTSSSLV 1263
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig906.20616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWW0_ECTSI2.720e-12886.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJI5_9PHAE3.890e-12084.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig906contigEcto-sp13_S_contig906:4425..6666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig906.20616.1mRNA_Ecto-sp13_S_contig906.20616.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig906 4409..6666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig906.20616.1 ID=prot_Ecto-sp13_S_contig906.20616.1|Name=mRNA_Ecto-sp13_S_contig906.20616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=314bp
MGSMPGLVDQDYASQHPQSQAPLDSNGPQQSIYRSSVASAEGERVPMLPG
GAQSSLVSTAIVAADAMRVRGTPGQGEEEDDGSGGVGGGGGSSAGKTMDA
SAEGAAAEGDFGDGDMVSGLSDRSGRSTFQRSRDQGDHASDIHPGEGADE
YVIRRSGSGNRPARSSNGTANGTGGVGGAGGAAATAANGGSGGARGERGE
EDLDMPELATPRDGEDGDMSFYDGNSRLEEEVVDNFADIPTPAPRGAGAR
GSGAVAGADGRTFRTQRSNSSEGWVDQYTSSSLVVSKAAPSASSQQQQQQ
QQAAAEAARGGAS*
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