prot_Ecto-sp13_S_contig906.20615.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig906.20615.1
Unique Nameprot_Ecto-sp13_S_contig906.20615.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length264
Homology
BLAST of mRNA_Ecto-sp13_S_contig906.20615.1 vs. uniprot
Match: D7FWV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV9_ECTSI)

HSP 1 Score: 516 bits (1329), Expect = 3.400e-175
Identity = 247/263 (93.92%), Postives = 257/263 (97.72%), Query Frame = 0
Query:    1 SNRYTDTTKTVFACLAFAPILPIAVWICLLSLALSYWSDKWLFMKAWQTPQPPGNSGRVAMLARRHLALAVLAHCVFALYYYAGWPFDRICRFKPGWIECSQEGTGLIQAETQAWMTPPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGESFEDYCLSSSRDMPRTSRYQRARLFSPCVHYPPPAPFEAIGNG 263
            S+RYTDTTKTVFACLA+AP+LPIA+WI LLSL+LSYWSDKWLF+KAW+TPQPPGNSGRVA LARRHLALAVLAHCVFALYYYAGWPFDRICRF  GWIECSQEGTGLI+AETQ+WMT PQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKG+SFEDYCLSSSRDMPRTSRYQRARLFS CVHYPPPAPFEAIGNG
Sbjct:  682 SDRYTDTTKTVFACLAYAPVLPIAMWIGLLSLSLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFDQGWIECSQEGTGLIEAETQSWMTGPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG 944          
BLAST of mRNA_Ecto-sp13_S_contig906.20615.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE)

HSP 1 Score: 516 bits (1328), Expect = 2.310e-171
Identity = 247/263 (93.92%), Postives = 257/263 (97.72%), Query Frame = 0
Query:    1 SNRYTDTTKTVFACLAFAPILPIAVWICLLSLALSYWSDKWLFMKAWQTPQPPGNSGRVAMLARRHLALAVLAHCVFALYYYAGWPFDRICRFKPGWIECSQEGTGLIQAETQAWMTPPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGESFEDYCLSSSRDMPRTSRYQRARLFSPCVHYPPPAPFEAIGNG 263
            S+RYTD TKTVFACLA+AP+LPIA+WI LLSLALSYWSDKWLF+KAW+TPQPPGNSGRVA LARRHLALAVLAHCVFALYYYAGWPFDRICRF+ GWIECSQEGTGLI+AETQAWMT PQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLD+VEPETIPWQVDGHKG+SFEDYCLSSSRDMPRTSRYQRARLFS CVHYPPPAPFEAIGNG
Sbjct:  670 SDRYTDMTKTVFACLAYAPVLPIAMWIGLLSLALSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFEQGWIECSQEGTGLIEAETQAWMTGPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDYVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG 932          
BLAST of mRNA_Ecto-sp13_S_contig906.20615.1 vs. uniprot
Match: A0A7S2YHU2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHU2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.530e-16
Identity = 69/294 (23.47%), Postives = 133/294 (45.24%), Query Frame = 0
Query:    1 SNRYTDTTKTVFACLAFAPILPIAVWICLLSLALSYWSDKWLFMKAWQTPQPPGNSGRVAMLARRH-LALAVLAHCVFALYYYAGWPFDRICR--------FKPGWIECSQEGTGLIQA--------------------------------ETQAWMTPPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGESFEDYCLSSSRDMPRTSRYQRARLFSPCVHYPP 253
            + RYT+ TK +F  + +  I P A+++C  +L ++Y++D++  M+ W+  + P    R++  +R + +  A++A  V   Y+++G+PFD +C         F   W+   + G   +                                  + + WMT  Q+T+ DV+   +V  +++L+V   L+        + KG+       Q + FS++ S     + AYVPQ++S+    PL+AC++D ++P    W  D  +  SF D    +   +  T    +  +FS   H+ P
Sbjct:  744 AERYTNMTKILFLTVFYLSIFPGALFLCSFALFVNYFTDRFSLMRTWK--RAPNYGPRMSEFSRTYFIPCAMVACAVMGSYFWSGFPFDNLCNRNTEIGQEFAGSWLVDPKGGGSNVTVSVATTDDAFDYCLQDFFRYGRDDESFPFISKFQKEQWMTDEQETVTDVWGWTSVG-VILLVVLKLLRGWWSSFWHLFKGSYEPCGQDQKINFSEVPS-----ISAYVPQVESNLFSYPLVACEVDEIDPNLFDW-TDPDRPFSFYDLTKDAEVLLKGTDVASKFSVFSQITHWSP 1028          
BLAST of mRNA_Ecto-sp13_S_contig906.20615.1 vs. uniprot
Match: W4G7D8_9STRA (RSN1_7TM domain-containing protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7D8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.870e-6
Identity = 46/172 (26.74%), Postives = 89/172 (51.74%), Query Frame = 0
Query:    1 SNRYTDTTKTVFACLAFAPILPIAVWICLLSLALSYWSDKWLFMKAWQTPQPPGNSGRVAMLARRHLALAVLAHCVFALYYYAGWP-FDRIC-RFKP-GWIECSQEGTGLIQAETQAWMTPPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMP 169
            ++RY+    T+F  L F+  +P+ + I L S+ ++YW+DK+ F++  ++P  P   G++A  A   L  AVL H +F ++ Y+    FD++  +F   G +    +  G I A     +T P + +  +  A+    LV ++VF Y  S +R +  +     +K +  +++P
Sbjct:  991 ASRYSVVINTIFITLMFSSGMPLMLLIGLFSMIITYWTDKFTFLRVVRSP--PQYDGKIAGAAGSLLPWAVLLHTLFGIWMYSNTQIFDKMTTQFSALGSLNAELQRGGRIVARA---ITMPSEVMFGLLVAIAAVALVRVVVFRYFGSALRSVFPICVRMMKKEKPPRNLP 1157          
BLAST of mRNA_Ecto-sp13_S_contig906.20615.1 vs. uniprot
Match: A0A485KVH9_9STRA (Aste57867_11946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVH9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.300e-5
Identity = 45/156 (28.85%), Postives = 78/156 (50.00%), Query Frame = 0
Query:    1 SNRYTDTTKTVFACLAFAPILPIAVWICLLSLALSYWSDKWLFMKAWQTPQPPGNSGRVAMLARRHLALAVLAHCVFALYYYAGWP-FDR----ICRFKPGWIECSQEGTGLIQAETQAWMTPPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGI 151
            + RY+    T+F  L F+  +P+ + I L S+ ++YW+DK+ F++  +  +PP   G +A  A   L  AVL H +F ++ Y+    F R    +   +    E  + G G I A     +T P + +  +  A+    LV L+VF Y  S++R +
Sbjct:  994 ATRYSVVINTIFITLLFSSGMPLMLLIGLFSMIVTYWTDKFTFLRVVR--RPPEYDGEIARAAGNLLPWAVLLHSLFGIWMYSNTDIFQRMDVNVTALQSINDELQKHG-GRIVARA---ITMPSEVMFALLVAIAAFALVRLVVFRYFASVLRSV 1143          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig906.20615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWV9_ECTSI3.400e-17593.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJI5_9PHAE2.310e-17193.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2YHU2_9STRA2.530e-1623.47Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
W4G7D8_9STRA1.870e-626.74RSN1_7TM domain-containing protein n=12 Tax=Aphano... [more]
A0A485KVH9_9STRA6.300e-528.85Aste57867_11946 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 66..85
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 122..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig906contigEcto-sp13_S_contig906:215..3108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig906.20615.1mRNA_Ecto-sp13_S_contig906.20615.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig906 215..3108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig906.20615.1 ID=prot_Ecto-sp13_S_contig906.20615.1|Name=mRNA_Ecto-sp13_S_contig906.20615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
SNRYTDTTKTVFACLAFAPILPIAVWICLLSLALSYWSDKWLFMKAWQTP
QPPGNSGRVAMLARRHLALAVLAHCVFALYYYAGWPFDRICRFKPGWIEC
SQEGTGLIQAETQAWMTPPQKTLVDVFSALNVAWLVILLVFYYLQSIMRG
ISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLAC
DLDFVEPETIPWQVDGHKGESFEDYCLSSSRDMPRTSRYQRARLFSPCVH
YPPPAPFEAIGNG*
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