prot_Ecto-sp13_S_contig9045.20602.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9045.20602.1
Unique Nameprot_Ecto-sp13_S_contig9045.20602.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.050e-41
Identity = 87/96 (90.62%), Postives = 87/96 (90.62%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATT        VAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXX NEINDIMGRSY
Sbjct:  139 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATT--------VAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXXNEINDIMGRSY 226          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.700e-30
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            METLKRKKMYE QRDQ+AGQQFNIEQT F IDSIKDT TT        V AMK A+K +K++ KK++I+++ED  DD+AXXXXXMNEINDIMGRSY
Sbjct:   65 METLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTT--------VQAMKGANKQIKSEFKKMNISEIEDTIDDLAXXXXXMNEINDIMGRSY 152          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.040e-29
Identity = 62/96 (64.58%), Postives = 72/96 (75.00%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            M+TLKRKKMYE QRDQMAGQ FNIEQT FAIDSIKDT TT        VAAMK A+ TLKA+ KK++I+ +ED  DD+      MNEIN++MGRSY
Sbjct:   65 MDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTT--------VAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEMMGRSY 152          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: F0Y671_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y671_AURAN)

HSP 1 Score: 111 bits (277), Expect = 1.420e-28
Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            M  LKRKKMYE QRDQ+AGQ FN+EQT FAIDS+KDT TT        V AMK ASKTLK + KK+DI+++ED+ DD+A     MNE+ D +GRSY
Sbjct:   65 MAVLKRKKMYEAQRDQLAGQAFNVEQTSFAIDSVKDTLTT--------VDAMKAASKTLKTEFKKVDIDQIEDVQDDLADMMEDMNEVQDALGRSY 152          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.740e-26
Identity = 65/96 (67.71%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            METLKRKKMYE QRDQMAGQ FNIEQT FAIDSIKDT TT        VAAMKDA+KTLKA+ KK++I+++ED      XXXXX   IND+MGR+Y
Sbjct:   91 METLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTT--------VAAMKDAAKTLKAETKKLNIDQIEDTQXXXXXXXXXXXXINDMMGRAY 178          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A7S2ALR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALR0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.160e-26
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDI 91
            M+TLKRKKMYE QRDQMAGQ FNIEQT FAIDSIKDT TT        VAAMK A+ TLKA+ KK++I+ +ED  DD+      MNEIN++
Sbjct:   65 MDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTT--------VAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEM 147          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A812Y1R2_SYMMI (CHMP5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1R2_SYMMI)

HSP 1 Score: 102 bits (254), Expect = 6.690e-25
Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            +E LKRKKMYE QRDQ+ GQ FN++Q  FA+++IKDT TT        VAAMKDA+K LK +  KID+N++ED+ DD+A     MNEI++ +GRSY
Sbjct:   65 VEVLKRKKMYEQQRDQLCGQAFNLDQAAFAMETIKDTHTT--------VAAMKDAAKQLKVEHAKIDLNEIEDLNDDLADMFEDMNEISETLGRSY 152          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.060e-24
Identity = 56/96 (58.33%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            M  L+RK+MYE QRDQ+AGQ FN+EQT FAIDS+KDT TT        V AMK ASKTLK ++KK+D++++ED+ DD+AXXXXX   + D++G+SY
Sbjct:   65 MGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTT--------VQAMKTASKTLKKEVKKVDLSQIEDLQDDLAXXXXXXXXVQDVLGQSY 152          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.000e-24
Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXMNEINDIMGRSY 96
            M  LKRKKMYE QRDQ+AGQ FNIEQT F IDS+KDT TT        V AMK ASKTLK + KK++I+K++D+ D   XXXXX NE+ D++GRSY
Sbjct:   74 MGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITT--------VDAMKAASKTLKTEFKKVNIDKIDDLQDXXXXXXXXXNEVQDVLGRSY 161          
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Match: A0A6H5JWU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.630e-22
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    1 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLV 49
            METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTAS FF FLV
Sbjct:   71 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASFFFSFLV 119          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9045.20602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ1_ECTSI1.050e-4190.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZMU4_9STRA3.700e-3069.79Snf7 family n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2AMY1_9STRA3.040e-2964.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y671_AURAN1.420e-2860.42Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2FVB6_9STRA2.740e-2667.71Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2ALR0_9STRA6.160e-2662.64Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A812Y1R2_SYMMI6.690e-2555.21CHMP5 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S4EE62_9STRA1.060e-2458.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K2P3_9STRA2.000e-2461.46Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6H5JWU6_9PHAE3.630e-2295.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availablePANTHERPTHR22761:SF12CHARGED MULTIVESICULAR BODY PROTEIN 5coord: 1..96
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 1..96
IPR005024Snf7 familyPFAMPF03357Snf7coord: 3..96
e-value: 9.0E-21
score: 74.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9045contigEcto-sp13_S_contig9045:1503..2372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9045.20602.1mRNA_Ecto-sp13_S_contig9045.20602.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9045 1392..2656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9045.20602.1 ID=prot_Ecto-sp13_S_contig9045.20602.1|Name=mRNA_Ecto-sp13_S_contig9045.20602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTASIFFLFLVA
AMKDASKTLKADIKKIDINKVEDMTDDMADMMEDMNEINDIMGRSYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam