prot_Ecto-sp13_S_contig9010.20567.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9010.20567.1
Unique Nameprot_Ecto-sp13_S_contig9010.20567.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9010.20567.1 vs. uniprot
Match: D7FTW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 3.860e-19
Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:  106 IGKTTNKIPGGDVTTTFPALIVSVSNYNTEYLSTNMTVDGVEDIAFGELFFCIEHGSYSRTAIAEVNPLDIEKFLGNICGFW 187
            IGKTT K   GDVTTTFP L++S S++  E        D  +D +FG L+  I+ G YSRTAIAEV+PLDI  FLGNI GFW
Sbjct:  119 IGKTTKKKLNGDVTTTFPPLVLSSSDFTAENTWATSEDDSFQDASFGRLYLDIKQGDYSRTAIAEVDPLDIGTFLGNIGGFW 200
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9010.20567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTW4_ECTSI3.860e-1956.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9010contigEcto-sp13_S_contig9010:3530..5259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9010.20567.1mRNA_Ecto-sp13_S_contig9010.20567.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9010 3090..5500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9010.20567.1 ID=prot_Ecto-sp13_S_contig9010.20567.1|Name=mRNA_Ecto-sp13_S_contig9010.20567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MLPPSAYSSTVHTPHLYLIGLESFASCILAVDPCLCIVRCRCCCCYCSYH
CYSWCCCQFFYSTIVFRSTCRKRSRRTTRYSSSWSCRTTESSLVRDVTLT
ETELLIGKTTNKIPGGDVTTTFPALIVSVSNYNTEYLSTNMTVDGVEDIA
FGELFFCIEHGSYSRTAIAEVNPLDIEKFLGNICGFWCTWRRMIFTLRAW
CLLHDPLEHRKDLVSSRRKAWDMITLWDLPRKVHR*
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