prot_Ecto-sp13_S_contig901.20565.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig901.20565.1
Unique Nameprot_Ecto-sp13_S_contig901.20565.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length497
Homology
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: D8LQ38_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ38_ECTSI)

HSP 1 Score: 676 bits (1743), Expect = 8.320e-241
Identity = 393/452 (86.95%), Postives = 407/452 (90.04%), Query Frame = 0
Query:   31 MALDDHASCSSGVMLLEVDECPSVGANIIFKNITGMLGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYSSSTRERAKAARKARPHVMLEYVSFHSAPLDSSQGIEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAYPITCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFRSRSRDESRGSQLDGRRITEGEVDGRMLPGRRSSPLPPASSARSTQVGAIQEERSLTIERAGE--RTQEQARVLEGIQQTGEVVPVRPDWDARGESKLADFAADDQPLAAEHNIAPDTAAAGIGAPIESAVVGSRPLDVGEAAVTASAGSKAADGCADRQGNEMGMSSSESSVPPPSERGVNTTRVAQPRAAPGFGREEVSLDELETGQAGTGKGRGIADVATDGFNA 480
            MALDD ASCSSGVMLLEVDECPSVGA+IIFKNITG+LGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVY+SSTRERAKAAR ARP +         APLDSSQGIEDV      XXXXXXXXXXXXXXXXXXXXXX+SA PITC ICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFRSRS DESRGSQLDGR  TEG VDG M P + SSPLPP SSARSTQVGA QEERSL IERAGE  RT  QARVLEGIQQTGEVVPVRPDWDARGESK+ADF AD QPLAA HNIAPDTAAAGIGAPI SAV+GSRPLDVGEAAVTA AGSKAAD CA+RQGNE+G+SSSES++PP SERGV TT VAQPRAAPGFGREEVSLDELETGQ GTGKGRGIADVATDGF+A
Sbjct:    1 MALDDDASCSSGVMLLEVDECPSVGADIIFKNITGILGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAARTARPQLQ--------APLDSSQGIEDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFRSRSPDESRGSQLDGRPRTEGGVDGGMPPVKPSSPLPPESSARSTQVGANQEERSLPIERAGESERTPLQARVLEGIQQTGEVVPVRPDWDARGESKMADFTADGQPLAAGHNIAPDTAAAGIGAPIASAVLGSRPLDVGEAAVTARAGSKAADSCANRQGNELGISSSESNIPPSSERGVKTTGVAQPRAAPGFGREEVSLDELETGQVGTGKGRGIADVATDGFSA 444          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A6H5KUT0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT0_9PHAE)

HSP 1 Score: 485 bits (1248), Expect = 6.840e-168
Identity = 263/308 (85.39%), Postives = 274/308 (88.96%), Query Frame = 0
Query:  191 VIKVLPCGHDFHSDCLDPWLEVKAECPLCK--APAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFRSRSRDESRGSQLDGRRITEGEVDGRMLPGRRSSPLPPASSARSTQVGAIQEERSLTIERAGERTQEQARVLEGIQQTGEVVPVRPDWDARGESKLADFAADDQPLAAEHNIAPDTAAAGIGAPIESAVVGSRPLDVGEAAVTASAGSKAADGCADRQGNEMGMSSSESSVPPPSERGVNTTRVAQPRAAPGFGREEVSLDELETGQAGTGKGRGIADVATDGFNAVVAEDGCDVGVDQVVL 496
            +IKVLPCGHDFHSDCLDPWLEVKAECPLCK  APAF KSR RDEVAHGRAVHAINSSAIAQAPPL RSRSR  SRGSQLDGRR  EG+VDG MLP R SSPLPP SSARST VGAIQEERSL IERAGERT EQARVLEG QQTGEVVP RPDWDA GESK+ADFAAD QPLAAEHNIA DTAA GIG P+ESAVVGSRPLDVGEAAVTASAG KAADGCADRQGNE+GM+SSES+VP  +E GVNTT VAQP AAPGFGREEV LDELETGQ GTGKGRGIA+VAT GF+AVVA+DGCDV VDQ VL
Sbjct:    5 LIKVLPCGHDFHSDCLDPWLEVKAECPLCKVPAPAFIKSRHRDEVAHGRAVHAINSSAIAQAPPLLRSRSRHASRGSQLDGRRRREGKVDGGMLPMRPSSPLPPESSARSTHVGAIQEERSLPIERAGERTPEQARVLEGTQQTGEVVPGRPDWDAWGESKMADFAADGQPLAAEHNIALDTAATGIGPPVESAVVGSRPLDVGEAAVTASAGGKAADGCADRQGNELGMASSESNVPQRAESGVNTTGVAQPPAAPGFGREEVPLDELETGQVGTGKGRGIANVATCGFSAVVAKDGCDVSVDQAVL 312          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A3F2RQ68_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ68_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.670e-11
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0
Query:  172 ESAYPITCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAF 224
            E++   +C +CL A+Q +  ++++PC H FH DC+DPWL+ KA CP+CK PA 
Sbjct:   73 EASENASCAVCLNAFQVDARVRMMPCFHHFHPDCIDPWLQEKASCPVCKFPAI 125          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A0D2MUW8_9CHLO (E3 ubiquitin-protein ligase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MUW8_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 9.120e-11
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0
Query:  179 CTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCK 220
            CTICL +Y++ EV+K LPCGH +HS+C+D WLE  A CPLCK
Sbjct:  205 CTICLGSYEDGEVLKQLPCGHSYHSECIDAWLEKSAVCPLCK 246          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A225WZ07_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ07_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.440e-10
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0
Query:  172 ESAYPITCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAF 224
            E++    CT+CL+A+Q +  ++++PC H FH +C+DPWL  KA CP+CK PA 
Sbjct:  136 EASENACCTVCLSAFQVDSQVRMMPCFHRFHPECIDPWLHEKATCPICKFPAI 188          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A3R7KYN5_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KYN5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.810e-10
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0
Query:  172 ESAYPITCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAF 224
            E++   +C +CL A+Q +  ++++PC H FH DC+DPWL+ KA CP+CK PA 
Sbjct:  139 EASENASCAVCLNAFQVDARVRMMPCFHRFHPDCIDPWLQEKASCPVCKFPAI 191          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A8C4X9G5_ERPCA (RING-type domain-containing protein n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4X9G5_ERPCA)

HSP 1 Score: 68.2 bits (165), Expect = 4.870e-10
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0
Query:  178 TCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFR 255
            TC++CLAA+ E ++++ LPC H+FH +C D WL   + CP+C+ P FT S       +   +H     A+   PP FR
Sbjct:   54 TCSVCLAAFIEGDILRNLPCSHEFHMNCSDQWLSKNSTCPICR-PNFTASAQLLHPVYDANLHP----ALQAGPPTFR 126          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: D0MYX3_PHYIT (RING-type domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYX3_PHYIT)

HSP 1 Score: 68.9 bits (167), Expect = 5.540e-10
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  178 TCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAF 224
            +CT+CL  +Q +  ++++PC H FH  C+DPWL+ K  CP+CK PAF
Sbjct:  133 SCTVCLNVFQVDAPVRMMPCFHRFHPQCIDPWLQEKGRCPICKFPAF 179          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: UPI001EB08A28 (E3 ubiquitin-protein ligase ZNRF3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB08A28)

HSP 1 Score: 73.2 bits (178), Expect = 6.020e-10
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  172 ESAYPITCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCK 220
            +S+   +C ICL  YQEE+V++VLPC HDFH  C+DPWL  K  CPLCK
Sbjct:  255 QSSASESCAICLEGYQEEQVLRVLPCNHDFHRICVDPWLLNKGTCPLCK 303          
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Match: A0A1A9V9E2_GLOAU (RING-type domain-containing protein n=1 Tax=Glossina austeni TaxID=7395 RepID=A0A1A9V9E2_GLOAU)

HSP 1 Score: 67.0 bits (162), Expect = 8.630e-10
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  178 TCTICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAF 224
            +C +CL  +Q  EVI+ LPC HDFH DC+D WL+++  CP+C+A  F
Sbjct:   83 SCAVCLNDFQLNEVIRKLPCAHDFHVDCVDKWLKLRRTCPMCRACVF 129          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig901.20565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ38_ECTSI8.320e-24186.95RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUT0_9PHAE6.840e-16885.39RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A3F2RQ68_9STRA4.670e-1147.17RING-type domain-containing protein n=1 Tax=Phytop... [more]
A0A0D2MUW8_9CHLO9.120e-1164.29E3 ubiquitin-protein ligase n=1 Tax=Monoraphidium ... [more]
A0A225WZ07_9STRA1.440e-1047.17E3 ubiquitin-protein ligase n=1 Tax=Phytophthora m... [more]
A0A3R7KYN5_9STRA2.810e-1047.17RING-type domain-containing protein n=2 Tax=Phytop... [more]
A0A8C4X9G5_ERPCA4.870e-1038.46RING-type domain-containing protein n=1 Tax=Erpeto... [more]
D0MYX3_PHYIT5.540e-1048.94RING-type domain-containing protein n=2 Tax=Phytop... [more]
UPI001EB08A286.020e-1059.18E3 ubiquitin-protein ligase ZNRF3-like n=2 Tax=Hal... [more]
A0A1A9V9E2_GLOAU8.630e-1051.06RING-type domain-containing protein n=1 Tax=Glossi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 178..220
e-value: 0.0077
score: 8.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 179..219
e-value: 8.4E-9
score: 45.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 178..220
e-value: 2.2E-12
score: 47.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 179..220
score: 13.138
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 157..230
e-value: 7.8E-19
score: 68.7
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 66..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..496
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 178..226
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig901contigEcto-sp13_S_contig901:10349..14819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig901.20565.1mRNA_Ecto-sp13_S_contig901.20565.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig901 8876..15132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig901.20565.1 ID=prot_Ecto-sp13_S_contig901.20565.1|Name=mRNA_Ecto-sp13_S_contig901.20565.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=497bp
MCSSSTCQGCARDDGCGWCNGPNAVTSGDCMALDDHASCSSGVMLLEVDE
CPSVGANIIFKNITGMLGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLP
VYVYSSSTRERAKAARKARPHVMLEYVSFHSAPLDSSQGIEDVESARSSS
SSPSTPVAPSSTRSRSSSEDSESAYPITCTICLAAYQEEEVIKVLPCGHD
FHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQA
PPLFRSRSRDESRGSQLDGRRITEGEVDGRMLPGRRSSPLPPASSARSTQ
VGAIQEERSLTIERAGERTQEQARVLEGIQQTGEVVPVRPDWDARGESKL
ADFAADDQPLAAEHNIAPDTAAAGIGAPIESAVVGSRPLDVGEAAVTASA
GSKAADGCADRQGNEMGMSSSESSVPPPSERGVNTTRVAQPRAAPGFGRE
EVSLDELETGQAGTGKGRGIADVATDGFNAVVAEDGCDVGVDQVVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD