prot_Ecto-sp13_S_contig8993.20536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8993.20536.1
Unique Nameprot_Ecto-sp13_S_contig8993.20536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8993.20536.1 vs. uniprot
Match: D8LS44_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS44_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 6.030e-24
Identity = 59/81 (72.84%), Postives = 61/81 (75.31%), Query Frame = 0 
Query:    2 EVDKAGANSGLCAQRTASASTTKATLPPLAHQDPSSMEKVQRLSWETPGEAAGREAVVVARREPEDGGVKPAAAPNEQQEP 82
            EVDKAG  SGLCAQRT             AHQDPSSMEKV+RLSWETPGEAA REAVV A REPEDG VKPAAAP+ QQEP
Sbjct:  728 EVDKAGGYSGLCAQRTXXXXXXXXXXXXAAHQDPSSMEKVKRLSWETPGEAARREAVVAATREPEDGRVKPAAAPSVQQEP 808
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8993.20536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS44_ECTSI6.030e-2472.84N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8993contigEcto-sp13_S_contig8993:520..768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8993.20536.1mRNA_Ecto-sp13_S_contig8993.20536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8993 520..768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8993.20536.1 ID=prot_Ecto-sp13_S_contig8993.20536.1|Name=mRNA_Ecto-sp13_S_contig8993.20536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
AEVDKAGANSGLCAQRTASASTTKATLPPLAHQDPSSMEKVQRLSWETPG
EAAGREAVVVARREPEDGGVKPAAAPNEQQEPF
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