prot_Ecto-sp13_S_contig8988.20527.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8988.20527.1
Unique Nameprot_Ecto-sp13_S_contig8988.20527.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8988.20527.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.590e-36
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 HYSDERARPRPDDAGDRSSTAVAAAAEGGGKMAGTGTKVSDQEGLLNKGSRSGSAHSGSSSRKRAKDLSRPSSPGEAQRERALITPVLTPDVG 93
            HYSDERARPRPDDAGD+S+TAVAAAAEGGG+MAGTGT+VSDQEGL NKG  SGS HSGS+SR+RA D+  PSSPG AQRE++L+TPVLTPDVG
Sbjct:  151 HYSDERARPRPDDAGDQSTTAVAAAAEGGGEMAGTGTQVSDQEGLFNKGGSSGSTHSGSTSRRRANDVGGPSSPGGAQREQSLVTPVLTPDVG 243
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8988.20527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI2.590e-3680.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8988contigEcto-sp13_S_contig8988:2881..3159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8988.20527.1mRNA_Ecto-sp13_S_contig8988.20527.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8988 2881..3161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8988.20527.1 ID=prot_Ecto-sp13_S_contig8988.20527.1|Name=mRNA_Ecto-sp13_S_contig8988.20527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
HYSDERARPRPDDAGDRSSTAVAAAAEGGGKMAGTGTKVSDQEGLLNKGS
RSGSAHSGSSSRKRAKDLSRPSSPGEAQRERALITPVLTPDVG
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