prot_Ecto-sp13_S_contig896.20496.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig896.20496.1
Unique Nameprot_Ecto-sp13_S_contig896.20496.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length420
Homology
BLAST of mRNA_Ecto-sp13_S_contig896.20496.1 vs. uniprot
Match: A0A6H5K4K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K0_9PHAE)

HSP 1 Score: 679 bits (1752), Expect = 4.910e-238
Identity = 372/424 (87.74%), Postives = 383/424 (90.33%), Query Frame = 0
Query:    1 MSQPPTPAGAHGGAGGTGWGPSRKRRRLPGPLAFLQHGAGSAGQQDGGGVSDDDSAQQRLSNDSDPNEGEAGGGHFTKGPWLSLCSAIDAPIAEDGASDSKAVQAFLRGAVSPMSEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPAPSRLEWLTTCDPPFTPQAVPDSGNGR---HHLSSRXXXXXXXXTSAATRQRGEGFDRRRPRAPSARQSPDYDQQQMTPRLSPPVRLSPQRLRRQEEDQHGQHQQTRRHLL-DEAKGERQGRQKPPQPSATSRNASPEVGSRSSVLNRGIKEMLPPSPSPPLGGSSPPGMLSQSLSPSPWEHQIALGQHRDDATEKGQAQGDEGAATAGDT 420
            MSQPPTPAGAHGGA G G+GPSRKRRRLPGPLAFLQHGAGSAGQQDG             SNDSDPN GEAGGGHFTKGPWLSLCSAIDAPIAE+GASDSKAVQAFLRGAVSPMSEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGP TTRLLNVHPDCVLAVF ADTSPPAPSRLEWLTTCDPPFTPQAVPDSGNGR         XXXXXXXX  AATRQRGEGFDRRRP+AP+AR+SP YDQQQMTPRLSPPVRLSPQRLRRQEEDQHGQHQQTRRHLL D+AKGE+QGRQKPPQPS  SRN S EVGS+SSVLN+G K+MLPPSPSP LGGSSPPGM SQS SPSPWEHQIALGQHRDD+ EKGQ QGDEGAATAGDT
Sbjct:   49 MSQPPTPAGAHGGAVGMGFGPSRKRRRLPGPLAFLQHGAGSAGQQDGXXXXXXXXXXXXXSNDSDPNGGEAGGGHFTKGPWLSLCSAIDAPIAEEGASDSKAVQAFLRGAVSPMSEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPATTRLLNVHPDCVLAVFAADTSPPAPSRLEWLTTCDPPFTPQAVPDSGNGRPXXXXXXXXXXXXXXXXXXAATRQRGEGFDRRRPQAPAARRSPVYDQQQMTPRLSPPVRLSPQRLRRQEEDQHGQHQQTRRHLLVDKAKGEQQGRQKPPQPSPNSRNVSQEVGSQSSVLNQGSKDMLPPSPSPSLGGSSPPGMFSQSQSPSPWEHQIALGQHRDDSKEKGQGQGDEGAATAGDT 472          
BLAST of mRNA_Ecto-sp13_S_contig896.20496.1 vs. uniprot
Match: D8LFD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD2_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 4.070e-120
Identity = 181/193 (93.78%), Postives = 185/193 (95.85%), Query Frame = 0
Query:   32 LAFLQHGAGSAGQQDGGGVSDDDSAQQRLSNDSDPNEGEAGGGHFTKGPWLSLCSAIDAPIAEDGASDSKAVQAFLRGAVSPMSEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPAPSRLEWLTTC 224
            +AF      SAGQQDGGGVSDD+SAQ+RLSNDSDPNEGEAGGGHFTKGPWLSLCSAIDAPIAE+GAS SKAVQAFLRGAVSPM EVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPAPSRLEWLTTC
Sbjct:    6 VAFCTFHLRSAGQQDGGGVSDDESAQRRLSNDSDPNEGEAGGGHFTKGPWLSLCSAIDAPIAEEGASGSKAVQAFLRGAVSPMLEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPAPSRLEWLTTC 198          
BLAST of mRNA_Ecto-sp13_S_contig896.20496.1 vs. uniprot
Match: A0A836CMX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.150e-27
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0
Query:   74 GHFTKGPWLSLCSAIDAPIAED------GASDSKAVQAFLRGAVSPMSEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPA 214
            GHF   PW++LC A+   + +       G S   A   F +     +++VLAG  DLR P++ AVID+ TK S +++VV L DP+G+I+  +H   L EH   L  GAAL L+  +I+VSGPGT R LN+HPD ++AVFP  T  P+
Sbjct:    1 GHFHCAPWVALCEALHILLPQQHRAAAAGGSTLCAESRFRQSFPCAIADVLAGRHDLRAPLIAAVIDTATKASDANLVVTLADPTGKIQAVVHQQALFEHAGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMPS 147          
BLAST of mRNA_Ecto-sp13_S_contig896.20496.1 vs. uniprot
Match: A0A6P8I575_ACTTE (uncharacterized protein C17orf53 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I575_ACTTE)

HSP 1 Score: 61.2 bits (147), Expect = 1.840e-6
Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 0
Query:   76 FTKGPWLSLCSAIDAPIAEDGASDSKAVQAFLR-GAVSPMSEVLAGDFDL-RVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTS 211
            FT+ PW+ + +              + V A +R   +  MSE         +VP +  ++ +++  S +D  + L DP+G I G LH   LEE+   LGPGA L+LK+VS+F   P     LN+ P  ++ ++P D S
Sbjct:  325 FTRDPWVGMFNEYQ-----------ENVPATMRYSIIQVMSEAACQRLRYGKVPSLCVLVKTFSS-SETDSSIFLKDPTGEIHGTLHKKVLEEYQTELGPGAGLILKQVSVFSPSP-RKHYLNITPGNIIEIYPPDPS 449          
BLAST of mRNA_Ecto-sp13_S_contig896.20496.1 vs. uniprot
Match: UPI000A2A8748 (uncharacterized protein LOC110250240 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8748)

HSP 1 Score: 57.8 bits (138), Expect = 2.280e-5
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query:  142 SDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTS 211
            +D  + L DP+G I G LH   LEE+   LGPGA ++LK+VS+F   P     LN+ P  ++ ++P D S
Sbjct:  365 TDSSIFLKDPTGEIHGTLHKKVLEEYPSELGPGAGIILKQVSVFSPSP-RKHYLNITPGNIIHIYPPDPS 433          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig896.20496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K4K0_9PHAE4.910e-23887.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFD2_ECTSI4.070e-12093.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMX7_9STRA2.150e-2742.86Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6P8I575_ACTTE1.840e-631.16uncharacterized protein C17orf53 homolog n=1 Tax=A... [more]
UPI000A2A87482.280e-541.43uncharacterized protein LOC110250240 n=1 Tax=Exaip... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028045Protein of unknown function DUF4539PFAMPF15072DUF4539coord: 125..208
e-value: 3.2E-17
score: 62.3
IPR028045Protein of unknown function DUF4539PANTHERPTHR14523UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOGcoord: 23..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig896contigEcto-sp13_S_contig896:10277..15671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig896.20496.1mRNA_Ecto-sp13_S_contig896.20496.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig896 10277..15671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig896.20496.1 ID=prot_Ecto-sp13_S_contig896.20496.1|Name=mRNA_Ecto-sp13_S_contig896.20496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=420bp
MSQPPTPAGAHGGAGGTGWGPSRKRRRLPGPLAFLQHGAGSAGQQDGGGV
SDDDSAQQRLSNDSDPNEGEAGGGHFTKGPWLSLCSAIDAPIAEDGASDS
KAVQAFLRGAVSPMSEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVD
PSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPD
CVLAVFPADTSPPAPSRLEWLTTCDPPFTPQAVPDSGNGRHHLSSRPPPP
PTTPTSAATRQRGEGFDRRRPRAPSARQSPDYDQQQMTPRLSPPVRLSPQ
RLRRQEEDQHGQHQQTRRHLLDEAKGERQGRQKPPQPSATSRNASPEVGS
RSSVLNRGIKEMLPPSPSPPLGGSSPPGMLSQSLSPSPWEHQIALGQHRD
DATEKGQAQGDEGAATAGDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028045DUF4539