prot_Ecto-sp13_S_contig895.20480.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig895.20480.1
Unique Nameprot_Ecto-sp13_S_contig895.20480.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
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BLAST of mRNA_Ecto-sp13_S_contig895.20480.1 vs. uniprot
Match: A0A6H5KJJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ2_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.240e-82
Identity = 121/126 (96.03%), Postives = 121/126 (96.03%), Query Frame = 0 
Query:   17 MWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQGSLESPSRIREAEEGDNSDEATLDAGSAKLWKTESQRWGSFYPKKRPPGVDPFCSQRSCWRKPRSKCDVTEYGDR 142
            MWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQGSLESPSRIR AEEGD SDEATLDA SAKLWKTESQRWGSFY KKRPPGVDPF SQRSCWRKPRSKCDVTEYGDR
Sbjct:    1 MWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQGSLESPSRIRLAEEGDKSDEATLDASSAKLWKTESQRWGSFYAKKRPPGVDPFSSQRSCWRKPRSKCDVTEYGDR 126
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BLAST of mRNA_Ecto-sp13_S_contig895.20480.1 vs. uniprot
Match: D8LK45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK45_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 4.400e-38
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 
Query:    1 MAKDDAKLVDEVSRQAMWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQ 67
            MAKD AK+VDEVSRQAMWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQ
Sbjct:    1 MAKDGAKVVDEVSRQAMWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQ 67
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BLAST of mRNA_Ecto-sp13_S_contig895.20480.1 vs. uniprot
Match: A0A835Z8L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 4.910e-16
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:    9 VDEVSRQAMWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLS 63
            VDEV+R  MW EVI KENA IG PH FFL+P+KL F+ RKPTEVDPR   A++ +
Sbjct:    3 VDEVARNKMWVEVINKENAVIGRPHTFFLDPSKLCFLPRKPTEVDPRALAAEAAA 57
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig895.20480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJJ2_9PHAE1.240e-8296.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK45_ECTSI4.400e-3897.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8L4_9STRA4.910e-1663.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029214FAM183 familyPFAMPF14886FAM183coord: 17..139
e-value: 9.0E-8
score: 32.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig895contigEcto-sp13_S_contig895:17319..19301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig895.20480.1mRNA_Ecto-sp13_S_contig895.20480.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig895 17287..19966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig895.20480.1 ID=prot_Ecto-sp13_S_contig895.20480.1|Name=mRNA_Ecto-sp13_S_contig895.20480.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
MAKDDAKLVDEVSRQAMWAEVIKKENATIGVPHRFFLNPNKLVFIARKPT
EVDPRTYEADSLSTGHQGSLESPSRIREAEEGDNSDEATLDAGSAKLWKT
ESQRWGSFYPKKRPPGVDPFCSQRSCWRKPRSKCDVTEYGDRLVSGDIDD
KVSSWCTSEILPPNMYLLQTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029214FAM183