prot_Ecto-sp13_S_contig89056.20430.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig89056.20430.1
Unique Nameprot_Ecto-sp13_S_contig89056.20430.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length61
Homology
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: D7FUR8_ECTSI (Nitrate high affinity transporter n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FUR8_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 3.830e-32
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVA+IRFFIGVMGATFVCTQFWSSQIFAKE
Sbjct:   95 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAIIRFFIGVMGATFVCTQFWSSQIFAKE 155          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: D7FUS1_ECTSI (Nitrate/nitrite transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUS1_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.820e-29
Identity = 54/61 (88.52%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CDTFGARI SSTLL+MGCIPT FAGLVNSATDVA+IRFFIGVMGATFVCTQ+W+SQ+FAKE
Sbjct:   95 CDTFGARITSSTLLLMGCIPTFFAGLVNSATDVAIIRFFIGVMGATFVCTQYWTSQVFAKE 155          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A7S2PGB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PGB4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.280e-16
Identity = 32/61 (52.46%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD +G RI+ ST+L++ C+PTA  G+V SATD+ +IR FIG+ G++FV  Q+W+S++F KE
Sbjct:  103 CDKYGPRIMMSTILLIACVPTALTGVVESATDLLIIRMFIGIGGSSFVMCQYWTSRMFTKE 163          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A6U3Y6P5_9STRA (Nitrate/nitrite transporter n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3Y6P5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.440e-15
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD +GARI+   LL+   IP A  GLVN A  +AV+RFFIG+ G+TFVC QFW+S++F KE
Sbjct:  108 CDKYGARILMGVLLMFASIPCALTGLVNDAASLAVLRFFIGLGGSTFVCCQFWTSRMFTKE 168          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A812P663_9DINO (NRT2.2 protein (Fragment) n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P663_9DINO)

HSP 1 Score: 77.0 bits (188), Expect = 2.740e-15
Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD FG R + S LL  G IP  F GLVN+AT +A IRFFIGV+GA FV  Q W SQ+FAKE
Sbjct:  131 CDVFGTRTMFSMLLSFGAIPVFFGGLVNNATGLATIRFFIGVLGACFVPCQAWCSQLFAKE 191          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: K0TAW8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAW8_THAOC)

HSP 1 Score: 74.7 bits (182), Expect = 2.940e-15
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD +GARI  S +L+   IP A  GLVNSAT +AV+RFFIG  G+TFV  Q+W+S++F KE
Sbjct:  100 CDKYGARIPMSIILVFASIPCACTGLVNSATSLAVLRFFIGFGGSTFVMCQYWTSRMFTKE 160          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A835YQD5_9STRA (Nitrate high affinity transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.850e-15
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD FGARI+ + LL  G IPT F GLV  AT +AV RFF+G +GATFV  Q WSS +F K 
Sbjct:  104 CDAFGARIVMAGLLFFGAIPTFFQGLVQDATGLAVCRFFVGFLGATFVANQAWSSAMFGKN 164          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A812ST29_9DINO (Nitrate/nitrite transporter n=2 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812ST29_9DINO)

HSP 1 Score: 76.3 bits (186), Expect = 9.380e-15
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD FG R + S LL  G IP  F GLVN+AT + +IRF IGV+GATFV  Q W SQ+FAKE
Sbjct:  119 CDRFGTRTMFSMLLTFGAIPVFFGGLVNNATGLVIIRFVIGVLGATFVPCQAWCSQLFAKE 179          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A835YTD5_9STRA (Nitrate high affinity transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.280e-14
Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD FGARI+ + LL  G IPT F GLV  A  +AV RFF+G +GATFV  Q WSS +F K 
Sbjct:  102 CDAFGARIVMACLLFFGAIPTFFQGLVQDAQGLAVCRFFVGFLGATFVANQAWSSAMFGKS 162          
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Match: A0A812SSL6_9DINO (Nitrate/nitrite transporter n=3 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SSL6_9DINO)

HSP 1 Score: 74.7 bits (182), Expect = 3.340e-14
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCTQFWSSQIFAKE 61
            CD FG R + S LL  G IP  F GLVN+ T + +IRF IGV+GATFV  Q W SQ+FAKE
Sbjct:  182 CDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKE 242          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig89056.20430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUR8_ECTSI3.830e-3298.36Nitrate high affinity transporter n=4 Tax=Ectocarp... [more]
D7FUS1_ECTSI2.820e-2988.52Nitrate/nitrite transporter n=2 Tax=Ectocarpus Tax... [more]
A0A7S2PGB4_9STRA7.280e-1652.46Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A6U3Y6P5_9STRA1.440e-1557.38Nitrate/nitrite transporter n=1 Tax=Skeletonema ma... [more]
A0A812P663_9DINO2.740e-1562.30NRT2.2 protein (Fragment) n=1 Tax=Symbiodinium nat... [more]
K0TAW8_THAOC2.940e-1557.38Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A835YQD5_9STRA6.850e-1559.02Nitrate high affinity transporter n=2 Tax=Tribonem... [more]
A0A812ST29_9DINO9.380e-1560.66Nitrate/nitrite transporter n=2 Tax=Symbiodinium n... [more]
A0A835YTD5_9STRA3.280e-1457.38Nitrate high affinity transporter n=1 Tax=Tribonem... [more]
A0A812SSL6_9DINO3.340e-1459.02Nitrate/nitrite transporter n=3 Tax=Symbiodinium n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..61
e-value: 8.4E-9
score: 37.0
NoneNo IPR availablePANTHERPTHR23515FAMILY NOT NAMEDcoord: 1..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..53
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig89056contigEcto-sp13_S_contig89056:23..205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig89056.20430.1mRNA_Ecto-sp13_S_contig89056.20430.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig89056 23..205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig89056.20430.1 ID=prot_Ecto-sp13_S_contig89056.20430.1|Name=mRNA_Ecto-sp13_S_contig89056.20430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
CDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAVIRFFIGVMGATFVCT
QFWSSQIFAKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf