prot_Ecto-sp13_S_contig88101.20298.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig88101.20298.1
Unique Nameprot_Ecto-sp13_S_contig88101.20298.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.460e-27
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 54
            MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR
Sbjct:  349 MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 402          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.730e-27
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 54
            MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR
Sbjct:  343 MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 396          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: A0A2K1JCS6_PHYPA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JCS6_PHYPA)

HSP 1 Score: 59.3 bits (142), Expect = 6.590e-9
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 54
            +AR  GKRS+++LEAE LGG KLQG  TA E F V+K +   +KFPL  T+++
Sbjct:  362 YARNGGKRSFDELEAELLGGQKLQGVLTAGEVFQVLKARNWEKKFPLFATVHK 414          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: A0A164VUW2_DAUCS (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164VUW2_DAUCS)

HSP 1 Score: 58.2 bits (139), Expect = 1.630e-8
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIY 53
            FA+  GKRS+++LEAE L G KLQG  TA E + V+ ++ C + FPL TT+Y
Sbjct:  280 FAKNGGKRSFDELEAEMLQGQKLQGALTAKEVYIVLSQRGCLQMFPLFTTVY 331          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: A0A251TVR0_HELAN (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=5 Tax=Asteraceae TaxID=4210 RepID=A0A251TVR0_HELAN)

HSP 1 Score: 55.8 bits (133), Expect = 1.090e-7
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIY 53
            FA+  GKRS++ LEAE L G KLQG STA E + V+K K     FPL TT++
Sbjct:  288 FAKNGGKRSFDDLEAEMLQGQKLQGVSTAKEVYEVLKHKGWLEMFPLFTTVH 339          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: A0A5A7PKZ6_STRAF (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PKZ6_STRAF)

HSP 1 Score: 55.5 bits (132), Expect = 1.490e-7
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIY 53
            FAR  GKRS+++LEAE L G KLQG STA E + V+  +K    FPL +T++
Sbjct:  280 FARNGGKRSFDELEAEMLQGQKLQGVSTAKEVYEVLSHRKWLELFPLFSTVH 331          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: A0A835HVN2_9MAGN (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HVN2_9MAGN)

HSP 1 Score: 55.5 bits (132), Expect = 1.500e-7
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIY 53
            FAR  GKRS+++LEAE L G KLQG STA E + V+ K+     FPL TT++
Sbjct:  299 FARNGGKRSFDELEAEMLQGQKLQGVSTARELYEVLSKRGWHELFPLFTTVH 350          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: UPI001C4E85EA (glycerol-3-phosphate dehydrogenase [NAD(+)]-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4E85EA)

HSP 1 Score: 55.1 bits (131), Expect = 2.040e-7
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIY 53
            FAR SG+RS+++LEAE L G KLQG  TA E   V++ +KC   FPL  T++
Sbjct:  304 FARNSGQRSFDELEAELLQGQKLQGVLTAGEVNAVLRHRKCLELFPLFRTVH 355          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: W1Q012_AMBTC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1Q012_AMBTC)

HSP 1 Score: 55.1 bits (131), Expect = 2.050e-7
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIY 53
            FA+ +GKRS+++LEAE L G KLQG STA E + V+  +     FPL TT+Y
Sbjct:  305 FAKNNGKRSFDELEAEMLQGQKLQGVSTAREVYEVLSHRGWQELFPLFTTVY 356          
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Match: C5KYJ9_PERM5 (Glycerol-3-phosphate dehydrogenase, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KYJ9_PERM5)

HSP 1 Score: 52.8 bits (125), Expect = 2.730e-7
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    2 FARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLTTIYR 54
            FAR  GK+SWE +E+E LGG KLQG  T +E   V+      ++ PL   IYR
Sbjct:   42 FARADGKKSWEDIESELLGGQKLQGTLTLLEIVDVLADAPIKKELPLFAAIYR 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88101.20298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZY6_9PHAE1.460e-27100.00Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
D7FUR6_ECTSI1.730e-27100.00Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A2K1JCS6_PHYPA6.590e-952.83Glycerol-3-phosphate dehydrogenase [NAD(+)] n=4 Ta... [more]
A0A164VUW2_DAUCS1.630e-851.92Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A251TVR0_HELAN1.090e-753.85Glycerol-3-phosphate dehydrogenase [NAD(+)] n=5 Ta... [more]
A0A5A7PKZ6_STRAF1.490e-751.92Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A835HVN2_9MAGN1.500e-753.85Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
UPI001C4E85EA2.040e-751.92glycerol-3-phosphate dehydrogenase [NAD(+)]-like n... [more]
W1Q012_AMBTC2.050e-751.92Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Ta... [more]
C5KYJ9_PERM52.730e-747.17Glycerol-3-phosphate dehydrogenase, putative n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0133286-phosphogluconate dehydrogenase, domain 2GENE3D1.10.1040.10coord: 1..54
e-value: 2.0E-12
score: 49.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig88101contigEcto-sp13_S_contig88101:404..565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig88101.20298.1mRNA_Ecto-sp13_S_contig88101.20298.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig88101 389..565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig88101.20298.1 ID=prot_Ecto-sp13_S_contig88101.20298.1|Name=mRNA_Ecto-sp13_S_contig88101.20298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
MFARESGKRSWEQLEAEELGGMKLQGPSTAVEAFGVIKKKKCARKFPLLT
TIYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0133286PGD_dom2