prot_Ecto-sp13_S_contig87710.20241.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig87710.20241.1
Unique Nameprot_Ecto-sp13_S_contig87710.20241.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: D7G271_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G271_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 6.460e-22
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 48
            IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE
Sbjct:  279 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 326          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: A0A835YND8_9STRA (Proteasome regulatory subunit C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-11
Identity = 34/46 (73.91%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIV 46
            IVQLLLGEVPER+VFN  G   +L PYL LTQAVR GDLVEFN  V
Sbjct:  326 IVQLLLGEVPERAVFNAAGMRAALAPYLQLTQAVRLGDLVEFNAAV 371          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: A0A7S4HBA1_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HBA1_GUITH)

HSP 1 Score: 65.9 bits (159), Expect = 1.350e-11
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEVG 50
            IVQLLLGE+P+RS F+QKG + +LKPYL + QAVR GDL  F+R + E G
Sbjct:   48 IVQLLLGEIPDRSTFSQKGMIAALKPYLQICQAVRVGDLGAFHRAMQEHG 97          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: A0A7S2FYH6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYH6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.130e-11
Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 48
            IVQLL+GEVPERS FN K +  +L PYL LTQAVR GDL+ FN  V E
Sbjct:  218 IVQLLMGEVPERSTFNHKEYRAALAPYLVLTQAVRAGDLLRFNAAVAE 265          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: A0A151ZHB8_9MYCE (26S proteasome regulatory subunit S3 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZHB8_9MYCE)

HSP 1 Score: 66.2 bits (160), Expect = 2.180e-11
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRI 45
            IVQLL+GE+PERS+F+QK    SLKPYL LTQ VR GDLV F+++
Sbjct:  292 IVQLLMGEIPERSIFSQKNLRASLKPYLILTQTVRVGDLVSFHKV 336          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: A0A7S2S1L3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1L3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.990e-11
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIV 46
            IVQLL+GEVPER+VFNQ  F  +L PYLALT+AVR GDL++FN+++
Sbjct:  326 IVQLLMGEVPERTVFNQPEFRGALAPYLALTKAVRVGDLMQFNQVL 371          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: L1I5U9_GUITC (26S proteasome regulatory complex, subunit RPN3 n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1I5U9_GUITC)

HSP 1 Score: 65.9 bits (159), Expect = 2.990e-11
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEVG 50
            IVQLLLGE+P+RS F+QKG + +LKPYL + QAVR GDL  F+R + E G
Sbjct:  331 IVQLLLGEIPDRSTFSQKGMIAALKPYLQICQAVRVGDLGAFHRAMQEHG 380          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: L8GZ19_ACACA (Proteasome (Prosome, macropain) 26S subunit, non ATPase, 32, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ19_ACACA)

HSP 1 Score: 64.3 bits (155), Expect = 1.040e-10
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEVG 50
            IVQLL+GE+PERSVF   G  V+L+PYL LTQAVR GDL  F+ +V   G
Sbjct:  291 IVQLLMGEIPERSVFRTSGLKVALRPYLKLTQAVRVGDLSAFHEVVKTFG 340          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: F0Y1W5_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1W5_AURAN)

HSP 1 Score: 63.5 bits (153), Expect = 1.940e-10
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEVGS 51
            +VQLL+GE+P+RS F+ +G    L+PYL LTQAVR+GDL+ +N++V + G+
Sbjct:  278 LVQLLMGEIPDRSAFDGEGMRGELEPYLKLTQAVRRGDLLAYNKVVADYGA 328          
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Match: A0A7S0Z039_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z039_9CRYP)

HSP 1 Score: 63.2 bits (152), Expect = 2.660e-10
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGE 48
            IVQLLLGE+P+RS+F+QKG V +L+PYL + QAVR GDL  F++ + E
Sbjct:  352 IVQLLLGEIPDRSIFSQKGMVSALRPYLHIAQAVRVGDLGAFHKAMQE 399          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87710.20241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G271_ECTSI6.460e-22100.00PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YND8_9STRA1.170e-1173.91Proteasome regulatory subunit C-terminal-domain-co... [more]
A0A7S4HBA1_GUITH1.350e-1162.00Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S2FYH6_9STRA2.130e-1166.67Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A151ZHB8_9MYCE2.180e-1166.6726S proteasome regulatory subunit S3 n=1 Tax=Tiegh... [more]
A0A7S2S1L3_9STRA2.990e-1167.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
L1I5U9_GUITC2.990e-1162.0026S proteasome regulatory complex, subunit RPN3 n=... [more]
L8GZ19_ACACA1.040e-1062.00Proteasome (Prosome, macropain) 26S subunit, non A... [more]
F0Y1W5_AURAN1.940e-1052.94PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S0Z039_9CRYP2.660e-1060.42Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 1..51
e-value: 6.0E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR1075826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3coord: 1..48
IPR03526726S proteasome non-ATPase regulatory subunit 3PANTHERPTHR10758:SF226S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3coord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig87710contigEcto-sp13_S_contig87710:27..182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig87710.20241.1mRNA_Ecto-sp13_S_contig87710.20241.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig87710 27..182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig87710.20241.1 ID=prot_Ecto-sp13_S_contig87710.20241.1|Name=mRNA_Ecto-sp13_S_contig87710.20241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
IVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEVG
S*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035267PSMD3