prot_Ecto-sp13_S_contig8752.20225.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8752.20225.1
Unique Nameprot_Ecto-sp13_S_contig8752.20225.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8752.20225.1 vs. uniprot
Match: D7G7Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z9_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.230e-25
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0 
Query:   68 GLELAKVAQQYAQQQGVPLPSLSGKEHTMDDTTPGAFGRTQSRGGLDGLLERASSVL 124
            GLELAKVAQQYAQQQGVPLPSLSGKE TMDDT PGAFGRTQSRGGLDGLLERASSVL
Sbjct:   20 GLELAKVAQQYAQQQGVPLPSLSGKEQTMDDTMPGAFGRTQSRGGLDGLLERASSVL 76
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BLAST of mRNA_Ecto-sp13_S_contig8752.20225.1 vs. uniprot
Match: A0A6H5JM82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM82_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.630e-25
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 
Query:   68 GLELAKVAQQYAQQQGVPLPSLSGKEHTMDDTTPGAFGRTQSRGGLDGLLERASSVL 124
            GLELAKVAQQYAQQQGVPLPSLSGKE TMDDT PGAFGRTQSRGGLDGLLERASS+L
Sbjct:   20 GLELAKVAQQYAQQQGVPLPSLSGKEQTMDDTMPGAFGRTQSRGGLDGLLERASSML 76
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8752.20225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7Z9_ECTSI1.230e-2596.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM82_9PHAE3.630e-2594.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8752contigEcto-sp13_S_contig8752:655..1477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8752.20225.1mRNA_Ecto-sp13_S_contig8752.20225.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8752 655..1477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8752.20225.1 ID=prot_Ecto-sp13_S_contig8752.20225.1|Name=mRNA_Ecto-sp13_S_contig8752.20225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
SPSLPISGNFSRTRASCTAACFVAFLGFGCRGRGDPPPACPIILRGITWY
GKSKRANAMVGGSSLWNGLELAKVAQQYAQQQGVPLPSLSGKEHTMDDTT
PGAFGRTQSRGGLDGLLERASSVL
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