prot_Ecto-sp13_S_contig8732.20198.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8732.20198.1
Unique Nameprot_Ecto-sp13_S_contig8732.20198.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Match: D7FSA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA4_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.100e-57
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    1 MSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGAF 96
            MS+VPAVGLFLGNLVCMCLSLVESATN+QKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGAF
Sbjct:   89 MSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGAF 184          
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Match: A0A6H5JEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE0_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 6.190e-55
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    1 MSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGAF 96
            MSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTML+VDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVF+SLCVTFAKARWVADGAF
Sbjct:  288 MSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLSVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFLSLCVTFAKARWVADGAF 383          
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Match: A0A7S2AAP3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAP3_TRICV)

HSP 1 Score: 61.6 bits (148), Expect = 3.310e-9
Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    4 VPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGA 95
            VP V LF+ N+   C++ V S T+  K RMK +L ++ + E  L  YN+L L    S  +P+E +VGR LTN +F+  C  F +  W A  A
Sbjct:  157 VPTVLLFVLNMAG-CVASVTSPTHGAKKRMKAILNLNKLSESALFAYNILRLTAAPSKYIPREIYVGRTLTNFLFLVQCQLFTRVTWGAAQA 247          
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Match: A0A7S4K0A4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0A4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.090e-9
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    4 VPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVA 92
            VP V LF+GN+   C++ V S ++  K RMK +L ++ + E LL +YN++ L    S  V +E +VGR L+N +FM  C  F +  W A
Sbjct:  137 VPTVALFIGNMAG-CVASVTSPSHSAKKRMKAILNLNKLIELLLFIYNVVRLTIFPSKFVQREIYVGRTLSNFIFMVQCQLFTRVTWGA 224          
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Match: A0A7S3V6B4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6B4_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.210e-7
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    5 PAVGLFLGNLVCMCLSLVESATNRQKARMKTMLTVDAVCEGLLLVYNML-LLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARW 90
            P V LF+ N+   C+  V S+ +  K RMK +L ++ + E  L+ YN+L LL+   + L+P+E +VGRIL+N +F+  C  F K  W
Sbjct:  197 PPVILFIANMAG-CVGSVMSSGHLGKKRMKAILNLNKLMEITLMAYNVLCLLIRTPTKLIPREIYVGRILSNFLFLVQCQLFTKVSW 282          
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Match: A0A7S2UQZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQZ7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.700e-6
Identity = 31/93 (33.33%), Postives = 50/93 (53.76%), Query Frame = 0
Query:    1 MSLVPAVGLFLGNLVCMCLSLVESATNRQ---KARMKTMLTVDAVCEGLLLVYNMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARW 90
            M + P V LF+G+LV  C +L+ +        K R K +L V  + E +L +YN++ +    +  V KE +VGR L+N +++  C  F K  W
Sbjct:  154 MLVAPPVFLFVGHLVAFCFALMTNRMQNDHPTKKRAKAILNVHKLVELVLFIYNIVRMAIFPNPHVIKEIYVGRALSNFIYLGYCQLFTKVSW 246          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8732.20198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FSA4_ECTSI1.100e-5797.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEE0_9PHAE6.190e-5597.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AAP3_TRICV3.310e-939.13Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4K0A4_9STRA4.090e-939.33Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3V6B4_9STRA2.210e-739.08Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2UQZ7_9STRA6.700e-633.33Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.576
NoneNo IPR availableTMHMMTMhelixcoord: 4..22
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8732contigEcto-sp13_S_contig8732:5549..6370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8732.20198.1mRNA_Ecto-sp13_S_contig8732.20198.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8732 4735..6377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8732.20198.1 ID=prot_Ecto-sp13_S_contig8732.20198.1|Name=mRNA_Ecto-sp13_S_contig8732.20198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLTVDAVCEGLLLVY
NMLLLLGGASGLVPKEEFVGRILTNVVFMSLCVTFAKARWVADGAF*
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