prot_Ecto-sp13_S_contig873.20195.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig873.20195.1
Unique Nameprot_Ecto-sp13_S_contig873.20195.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length221
Homology
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: A0A6H5JYI5_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI5_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 9.980e-102
Identity = 198/220 (90.00%), Postives = 206/220 (93.64%), Query Frame = 0
Query:    1 MFFSRRTALSVVVAATALLVPDHVSLAATTTDQDTTGTTVTATSMEPTGTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSTMEEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGDFNCGGEYNCIDPEAVCVEDDDGDGGELTTAELEDDGITDEMADDARTADDDTSAAGTTSLSSMVIGVATAAGAASVFAAHTAL 220
            MFFSRRTALSVVVAATALL PDHVSLAATTTDQDTTGTTVTATSMEP     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +TST+EEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPG FNCGG+YNCIDPEAVCVEDDD DGGE+TTAELEDDGITDEMADDARTADDDTSA+GTTS SS+V G+ATAAGAA VFAA+ AL
Sbjct:    1 MFFSRRTALSVVVAATALLAPDHVSLAATTTDQDTTGTTVTATSMEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTTSTLEEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGGDYNCIDPEAVCVEDDDEDGGEMTTAELEDDGITDEMADDARTADDDTSASGTTSFSSIVTGIATAAGAAYVFAAYIAL 220          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 8.050e-13
Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 0
Query:  103 DFSFAGDGKCHEDLNTEVCGYDGGDCCSCTC-EPGDFNCG-GEYNCIDPEAVCVEDDD 158
            D S  GDG C  D+N   CGYDGGDCC CTC   G++ CG G Y CIDP A CV DDD
Sbjct:   43 DESAVGDGNCDRDINFAECGYDGGDCCECTCVAEGEYECGAGGYACIDPAAECVNDDD 100          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.310e-12
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   89 MEEDDEPGGSYEDCDFSFA-GDGKCHEDLNTEVCGYDGGDCCSCTCE---------PGDFNCGGEYNCIDPEAVCVEDDD 158
            +++DD     +E+CD++ + GDG C E  N E CGYDGGDCC CTCE           D++C  E++CIDP A CV DDD
Sbjct:   80 VDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCR-EFSCIDPNAACVSDDD 158          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.570e-11
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   89 MEEDDEPGGSYEDCDFSFA-GDGKCHEDLNTEVCGYDGGDCCSCTC--EPGDFN------------CGGEYNCIDPEAVCVEDDD 158
            +E+DD      E+C +    GDG CHE+ N E+CGYDGGDCC CTC   P D +            CGG + CIDP A CV+DD+
Sbjct:  121 VEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDE 205          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.630e-11
Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   91 EDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCE---PGDFNCGGEYNCIDPEAVCVEDDD 158
            +DD   G +EDC F+F GDG C++  N E CGYDGGDCC CTC      +F C  E+ CIDP A CV+DDD
Sbjct:   48 DDDVTEGMFEDC-FNF-GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCT-EFACIDPTAPCVDDDD 115          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.050e-11
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   87 STMEEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTC-----EPGDFNCGGEYNCIDPEAVCVEDDD 158
            S +++DD      ++CD    GDG C +D N E+CGYDGGDCC CTC     +  D+ C     CIDP+A CV+DDD
Sbjct:   58 SCVDDDDITVEIAQNCDTWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDD 134          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 7.030e-11
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   99 YEDCDFSF-AGDGKCHEDLNTEVCGYDGGDCCSCTCEPGDFNCGGEYN--CIDPEAVCVEDD 157
            ++ CD +   G+G+C+   N E CG+DGGDCC CTCE G++ CG  Y   CIDP+A CV+DD
Sbjct:   89 FDACDAAQDIGNGRCNMGNNIEECGFDGGDCCECTCEDGEYTCGQYYGYACIDPDATCVDDD 150          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 7.280e-11
Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   91 EDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCE---PGDFNCGGEYNCIDPEAVCVEDDD 158
            +DD   G +EDC F+F GDG C++  N E CGYDGGDCC CTC      +F C  E+ CIDP A CV+DDD
Sbjct:  197 DDDVTEGMFEDC-FNF-GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCT-EFACIDPTAPCVDDDD 264          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.160e-10
Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   85 STSTMEEDDEPGGSYEDCDF-SFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGDFN----------CGGEYNCIDPEAVCVEDDD 158
            S   +++DD      E+C +    G+G C E+ N E CGYDGGDCC CTC+P D +          CG  + CIDP A CV DDD
Sbjct:  107 SAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDD 191          
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.550e-10
Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0
Query:  100 EDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCE-PGDFN--------CGGEYNCIDPEAVCVEDDD 158
            ++CDF   GDG C +  N E+CGYDGGDCC CTCE P D +        CG  + CIDP A CV DDD
Sbjct:  102 QECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDD 169          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig873.20195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYI5_9PHAE9.980e-10290.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L262_9PHAE8.050e-1360.34LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB04_9PHAE4.310e-1247.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM92_9PHAE1.570e-1145.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSR3_ECTSI2.630e-1154.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR2_9PHAE4.050e-1146.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP6_ECTSI7.030e-1151.61Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE7.280e-1154.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S4_ECTSI1.160e-1043.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI1.550e-1052.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 90..129
e-value: 0.0011
score: 24.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.703

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig873contigEcto-sp13_S_contig873:6614..9302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig873.20195.1mRNA_Ecto-sp13_S_contig873.20195.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig873 2365..10090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig873.20195.1 ID=prot_Ecto-sp13_S_contig873.20195.1|Name=mRNA_Ecto-sp13_S_contig873.20195.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
MFFSRRTALSVVVAATALLVPDHVSLAATTTDQDTTGTTVTATSMEPTGT
TSTGTTDTATSMEPTGTTPTETTDSTTSMEPTDTSTSTMEEDDEPGGSYE
DCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGDFNCGGEYNCIDPE
AVCVEDDDGDGGELTTAELEDDGITDEMADDARTADDDTSAAGTTSLSSM
VIGVATAAGAASVFAAHTAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom