prot_Ecto-sp13_S_contig8713.20179.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8713.20179.1
Unique Nameprot_Ecto-sp13_S_contig8713.20179.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length422
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8713.20179.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE)

HSP 1 Score: 630 bits (1624), Expect = 1.120e-216
Identity = 346/393 (88.04%), Postives = 351/393 (89.31%), Query Frame = 0 
Query:    1 QISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSVRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVAEGVEEASGGGNSTSKGQGAXXXXXXXXLSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSSHXXXXXXXXVGGAADRIGDGSSVGGVAETRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSAGAAAAAPA--GSVSSFLDVKTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQVQHCSKETPLYQVPPFGGQRTVRGFAEGELGRAKEYATSTAEVRVPLRHLFGTLPTQAVLFLDLAAFRSVTWPRGAA 391
            +ISFEE NVLGRNGVMGLKLHRSMSSPFTSFS+RMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGV EGVEEASGGGNSTSKGQGA XXXX    SSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHS  XXXXXXXX                  ETRRG WDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPS           GSVSSFLDVKTGCLLEGG APRPFSHESATLVHRVP+GPHGKGGSWN TLNVRHQVQHCSK+TPLYQVPPFGGQRTVRGFAEG LGRAKEYATSTAEVRVPLR+LFGTLPTQAVLFLDLAAFRSVTWPRGAA
Sbjct:  422 EISFEETNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVTEGVEEASGGGNSTSKGQGAVXXXX---XSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXETRRGSWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSGXXXXXXXXXXGSVSSFLDVKTGCLLEGGVAPRPFSHESATLVHRVPLGPHGKGGSWNATLNVRHQVQHCSKDTPLYQVPPFGGQRTVRGFAEGGLGRAKEYATSTAEVRVPLRNLFGTLPTQAVLFLDLAAFRSVTWPRGAA 811
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BLAST of mRNA_Ecto-sp13_S_contig8713.20179.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 2.430e-184
Identity = 316/377 (83.82%), Postives = 322/377 (85.41%), Query Frame = 0 
Query:    1 QISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSVRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVAEGVEEASGGGNSTSKGQGAXXXXXXXXLSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSSHXXXXXXXXVGGAADRIGDGSSVGG-----VAETRR-GLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSAGAAAAAPAGSVSSFLDVKTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQVQHCSKETPLYQVPPFGGQRTVRGFAEGELGRAKEYATSTAEVRVPLRHLFGTLPTQ 371
            +ISFEEKNVLGRNGVMGLKLHRSMSSPFTSFS+RMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGV EGVEEASGGGNSTSKG  A  XXXXX LSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKH   XXXXXXXX                     VAE+RR GLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGG GPS GAAAAA AGSVSS+LDV+TGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQV                     RGFAEGELGRAKEYATSTAEVRVPLR+LFGTLPTQ
Sbjct:  226 EISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVTEGVEEASGGGNSTSKGHRAGAXXXXX-LSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGAGPSTGAAAAA-AGSVSSYLDVRTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQV---------------------RGFAEGELGRAKEYATSTAEVRVPLRNLFGTLPTQ 579
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8713.20179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZW3_9PHAE1.120e-21688.04Omp85 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LKK3_ECTSI2.430e-18483.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000184Bacterial surface antigen (D15)PFAMPF01103Bac_surface_Agcoord: 305..387
e-value: 1.7E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8713contigEcto-sp13_S_contig8713:507..6198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8713.20179.1mRNA_Ecto-sp13_S_contig8713.20179.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8713 506..6198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8713.20179.1 ID=prot_Ecto-sp13_S_contig8713.20179.1|Name=mRNA_Ecto-sp13_S_contig8713.20179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
QISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSVRMGNNRFGQPGGWQLSF
FRDCLAPYSGFARGGGGGGGYANNALGPASSAPDFSTASPAGVPRDLSML
ARSIQGAQHGRGVAEGVEEASGGGNSTSKGQGAGAAASGGGLSSSHGVSL
SSSWPFAIAKVTAAAGYQQISPPTNVLRKHSSHHDDTLPPPVGGAADRIG
DGSSVGGVAETRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPS
AGAAAAAPAGSVSSFLDVKTGCLLEGGAAPRPFSHESATLVHRVPVGPHG
KGGSWNVTLNVRHQVQHCSKETPLYQVPPFGGQRTVRGFAEGELGRAKEY
ATSTAEVRVPLRHLFGTLPTQAVLFLDLAAFRSVTWPRGAACCCCCCCCR
QPAAAAAAPRVGDRARRSRGGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15