mRNA_Ecto-sp13_S_contig8713.20179.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8713.20179.1
Unique NamemRNA_Ecto-sp13_S_contig8713.20179.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8713.20179.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE)

HSP 1 Score: 630 bits (1624), Expect = 1.120e-216
Identity = 346/393 (88.04%), Postives = 351/393 (89.31%), Query Frame = 1 
Query:    1 QISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSVRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVAEGVEEASGGGNSTSKGQGAXXXXXXXXLSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSSHXXXXXXXXVGGAADRIGDGSSVGGVAETRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSAGAAAAAPA--GSVSSFLDVKTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQVQHCSKETPLYQVPPFGGQRTVRGFAEGELGRAKEYATSTAEVRVPLRHLFGTLPTQAVLFLDLAAFRSVTWPRGAA 1173
            +ISFEE NVLGRNGVMGLKLHRSMSSPFTSFS+RMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGV EGVEEASGGGNSTSKGQGA XXXX    SSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHS  XXXXXXXX                  ETRRG WDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPS           GSVSSFLDVKTGCLLEGG APRPFSHESATLVHRVP+GPHGKGGSWN TLNVRHQVQHCSK+TPLYQVPPFGGQRTVRGFAEG LGRAKEYATSTAEVRVPLR+LFGTLPTQAVLFLDLAAFRSVTWPRGAA
Sbjct:  422 EISFEETNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVTEGVEEASGGGNSTSKGQGAVXXXX---XSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXETRRGSWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSGXXXXXXXXXXGSVSSFLDVKTGCLLEGGVAPRPFSHESATLVHRVPLGPHGKGGSWNATLNVRHQVQHCSKDTPLYQVPPFGGQRTVRGFAEGGLGRAKEYATSTAEVRVPLRNLFGTLPTQAVLFLDLAAFRSVTWPRGAA 811
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8713.20179.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 2.430e-184
Identity = 316/377 (83.82%), Postives = 322/377 (85.41%), Query Frame = 1 
Query:    1 QISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSVRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVAEGVEEASGGGNSTSKGQGAXXXXXXXXLSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSSHXXXXXXXXVGGAADRIGDGSSVGG-----VAETRR-GLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPSAGAAAAAPAGSVSSFLDVKTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQVQHCSKETPLYQVPPFGGQRTVRGFAEGELGRAKEYATSTAEVRVPLRHLFGTLPTQ 1113
            +ISFEEKNVLGRNGVMGLKLHRSMSSPFTSFS+RMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGV EGVEEASGGGNSTSKG  A  XXXXX LSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKH   XXXXXXXX                     VAE+RR GLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGG GPS GAAAAA AGSVSS+LDV+TGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQV                     RGFAEGELGRAKEYATSTAEVRVPLR+LFGTLPTQ
Sbjct:  226 EISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCLAPYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGVTEGVEEASGGGNSTSKGHRAGAXXXXX-LSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGAGPSTGAAAAA-AGSVSSYLDVRTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQV---------------------RGFAEGELGRAKEYATSTAEVRVPLRNLFGTLPTQ 579
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8713.20179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZW3_9PHAE1.120e-21688.04Omp85 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LKK3_ECTSI2.430e-18483.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8713contigEcto-sp13_S_contig8713:506..6198 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size1267
Hectar predicted targeting categoryother localisation
Exons8
Cds size1266
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8713.20179.1prot_Ecto-sp13_S_contig8713.20179.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8713 507..6198 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464144.4793634-CDS-Ecto-sp13_S_contig8713:506..6591681464144.4793634-CDS-Ecto-sp13_S_contig8713:506..659Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 507..659 -
1681464144.4908113-CDS-Ecto-sp13_S_contig8713:1097..12051681464144.4908113-CDS-Ecto-sp13_S_contig8713:1097..1205Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 1098..1205 -
1681464144.502269-CDS-Ecto-sp13_S_contig8713:1983..20461681464144.502269-CDS-Ecto-sp13_S_contig8713:1983..2046Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 1984..2046 -
1681464144.5120265-CDS-Ecto-sp13_S_contig8713:2823..29071681464144.5120265-CDS-Ecto-sp13_S_contig8713:2823..2907Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 2824..2907 -
1681464144.5209682-CDS-Ecto-sp13_S_contig8713:3474..38251681464144.5209682-CDS-Ecto-sp13_S_contig8713:3474..3825Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 3475..3825 -
1681464144.5300474-CDS-Ecto-sp13_S_contig8713:4292..45151681464144.5300474-CDS-Ecto-sp13_S_contig8713:4292..4515Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 4293..4515 -
1681464144.541434-CDS-Ecto-sp13_S_contig8713:5177..53661681464144.541434-CDS-Ecto-sp13_S_contig8713:5177..5366Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 5178..5366 -
1681464144.56027-CDS-Ecto-sp13_S_contig8713:6103..61981681464144.56027-CDS-Ecto-sp13_S_contig8713:6103..6198Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8713 6104..6198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8713.20179.1

>prot_Ecto-sp13_S_contig8713.20179.1 ID=prot_Ecto-sp13_S_contig8713.20179.1|Name=mRNA_Ecto-sp13_S_contig8713.20179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
QISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSVRMGNNRFGQPGGWQLSF
FRDCLAPYSGFARGGGGGGGYANNALGPASSAPDFSTASPAGVPRDLSML
ARSIQGAQHGRGVAEGVEEASGGGNSTSKGQGAGAAASGGGLSSSHGVSL
SSSWPFAIAKVTAAAGYQQISPPTNVLRKHSSHHDDTLPPPVGGAADRIG
DGSSVGGVAETRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPS
AGAAAAAPAGSVSSFLDVKTGCLLEGGAAPRPFSHESATLVHRVPVGPHG
KGGSWNVTLNVRHQVQHCSKETPLYQVPPFGGQRTVRGFAEGELGRAKEY
ATSTAEVRVPLRHLFGTLPTQAVLFLDLAAFRSVTWPRGAACCCCCCCCR
QPAAAAAAPRVGDRARRSRGGV
back to top

mRNA from alignment at Ecto-sp13_S_contig8713:506..6198-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8713.20179.1 ID=mRNA_Ecto-sp13_S_contig8713.20179.1|Name=mRNA_Ecto-sp13_S_contig8713.20179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5693bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8713:506..6198- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATATCCTTCGAGGAGAAGAACGTGCTTGGTCGAAACGGCGTGATGGG
GTTGAAACTCCACCGCTCCATGTCGTCTCCCTTCACTAGCTTCAGGTGAA
ACAATAGCGGCTTCCGGTGCCACAATCCCGTGGCTCTACAATGCCTCGTA
GACCCCCGCTGGGTTCGCATTGCTGTGTACAGATTTATAAACTTTTCTTT
GAGGTTCGCTGCGCTCGTCGAGTGAAAAACACGGTCAGCTGTGTGAGCGT
GGGACACGTCACAGCTGGCCGGCTTTGGGCTGGTCGTCTGCCTGCGTTTC
AATTCCGTCTTGCAGCACCCCTGGATGATACTACTCTTTCATAAGCCCAC
GCCGGAGGCATCACTCGTTGCTGTGAAACCCGTCACGGTGATCTTGGTCT
GTTTTCGTTTTTGTGTTGTTTTTGGTCACCCTGTTCGCCCAACACGTCTT
CTTGGTTTGGATATGTATGTACTGCTGTACACGGCCGATAGATAGAGGAG
GGCCACTTGTAAGACCTGACAAGTTAGGAAGGGTATCTGTAAAGGGCAGT
GATATATAGGGAATCGTCTGTTGAAGATATTTCCTCCCTCCGTCTGCTCG
GAACGACTGCTGCGCTCGGAATGTTTGCTCGAGCAAACCCAGGTTCCAAC
TCGAGGCTATTTCACTTGAGCCCCCCACCCCCCGATCACCTTCCTCGTGT
AATGTCCGCGTTGCCTTTCTTATTCACTTTCTCCTCTGTCTCTGATTTCC
AACGAACGAAGGCCGTATTCCGTTTCTCAACTCTGCACCATTCTCCTGCT
TCCAAAAACTGAATGTGAAAAAAAAAACACAGCGTTCGCATGGGCAACAA
CCGCTTCGGGCAGCCGGGGGGCTGGCAGCTCTCCTTTTTCCGTGACTGCC
TCGCCCCATACAGCGGCTTCGCCCGCGGTGGCGGCGGTGGCGGCGGCTAC
GCCAACAACGCTCTAGGCCCAGCATCGTCGGCCCCCGATTTTTCCACCGC
GTCTCCGGCTGGAGTTCCAAGGTATGCGAAGAGGCTTTAGGCGGAAGGAG
CATTGTGATTTTCTGCATCTAAATATTTTTTCGGGCGCGTCCTAAGTTGC
TTTTCTTTTCATCCGCGCGATTGGTTGTGATCATAATTTGCCACCCACCC
GCTGACCCCGCCTCCACCCCCGGGTTCCTCCCCCGCAAATGTATGCTACT
CGCCTTAGCCTTTGGCTCGTGCGGGTTCTAGTGCATGACTTAGTCGGTCG
CGGAACCGTTCCCCCATTGCTTGTATTTCTTAGAGGACGTTGCACGTTGT
ATCGAAATCACATGTATCACGTGATAACGTAAGGGATGCTGGTTGGTTTG
CCAAGTTTAACAGCTGAAAATTATACCTATGGTATTTTTTACAGCACTGA
GCCCTCTGTAGTGCACAGAGGTGTGTCCAGAGATTGTACTGCACTATACT
GGCCACCTCAGGATCGAGGAATATATGGGTGTTAGTATACCAACTTAAAT
CTGTGTCATCAGAGATCACCGGATGTATCGGGCACCTACACTACTCAACC
TGCGCTATAGAGGGCCCAGTACTGCCAGTAGGTATTTTTTTTTCAGAAGA
CAAATCAAGCCACCACCCCGCACCATCGGTGACCACAAAATACCCCACCG
CCGGCCCTTAACGCGCCGCCTGCGACGTGGCAGGGATCTGAGCATGCTGG
CTCGGTCCATTCAAGGGGCGCAGCACGGGAGGGGCGTAGCCGAGGGCGTA
GAGGAGGCCTCGGGCGGCGGGAACTCCACAAGCAAGGGGCAAGGGGCGGG
GGCGGCGGCGTCGGGAGGCGGTCTGTCCAGCTCCCACGGGGTGTCGCTGT
CCTCTTCTTGGCCTTTCGCCATCGCGAAGGTCACCGCGGCGGCGGGGTAC
CAGCAGGTGGGGCGTCGTGTTGGTGCATGTTGTTGTTGTTGTTGTTGTTG
TGTTGGTGATGTTGTTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTACTGTTGTTGTTATATTTTGCTGCCGCTGTTGCTGTTGTATTG
TCGTGCTGTTGCTACTGCAGTAACACTGTTATTTGGTGTCGCTGAGCGGC
GGCCGGCCCGCACGGTCTTCATTGAGGTAACGCACAGAGACGCGCACCCA
GAGGACCCTTGAAGTAACCATAAGAAATGACAGCGCCAGCCGGTTTACTC
GTACAACTCCTCTCCTCAGGTTCCCTCCCGCCGATTTGGCTGTCCGACTC
GTCACCCATAACACCGAACCAACACAAGCGTGTCACCCTCCTGGATCCCG
CCGCCCTTCTCACCATTGTCGGCTCCGCGACGACGACCACAAACCCCTTT
TGTTTCTCGCTCCCACCACCCAGATATCTCCGCCTACCAACGTCCTCAGA
AAGCACAGCTCCCACCACGACGACACGCTTCCTCCTCCCGTAGGCGGCGC
CGCCGACCGAATCGGCGACGGCTCCTCCGTTGGCGGCGTTGCGGAAACCC
GTCGGGGTTTGTGGGATGACAGCGGGGCCATGGACCTCTTGACACTGTCC
GGGGGGGTTTCGAGAGACTGGAGACTCCCGGGCGTGCTGCGCCGGCTCGG
GGGCAAGGGGCCCTCGGCGGGGGCGGCGGCAGCGGCACCCGCGGGGTCGG
TGTCGTCCTTCTTGGACGTGAAGACGGGGTGCCTGCTGGAGGGAGGGGCG
GCGCCGCGGCCGTTCTCGCACGAGGTGAGCCGGCCGCCGTTGTTGTTGTT
GTTCTTGTTGTTGTTCTTGTTGTTGTTGTTGTTCTTGTTCTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTG
TGGTTGGTGTTGTTGCTGTTGTCGTTTTTGTTAACATCTGATTCCTCTGT
TTTGTTTTGTTTTACAATCTGTATGAAAATCCCACCCCCGCAGCGTGCCG
CTCGGAAGTACATCCCCCCGCTCTCGGCCCCAAAGTGGCAAGTAAACCGT
CCTCTCTCCTCACAGAACCCATCGCGTGGCTACGATGGGTACCCTGATAA
TGAGCAGTAAAGTTCGATGGATACTTAACGCGACACCTTTATCCCGGTAC
CCTGGTAGATACCACAAGCGATGTACCGCCCTGGATGCATGTATCGGATC
GGCTATCCTGCCTCTGCCTACATCTGACCCCGCGTCGTTGTCTTTTTGCC
GTCGCCTGCCGTATCTGTCTCCCTTTTCTTGGCTTACCGCTTTGGTCTTG
TGTCTCGCGACTTTTGGGGGGCATTTCTGGGGGAATAATAGTCGGCCACC
TTGGTGCACCGGGTGCCTGTTGGACCCCACGGAAAAGGAGGGTCCTGGAA
CGTCACCCTCAACGTTAGGCACCAGGTAAGAGATGCTGCGTGCTGTGTGC
AGCGTGATTGTCCCGGTCTACTCTGTCGCCAGTCCACCCGCGGTTCGGTA
TGTATGCATACGACATACTCCGTGTTGGCGTATCATCAGCCGGTGTCGCA
CACAGGAAGAAGCTTAGACATGAAGTTTTTTTCGGTGCGTCGGATAGCGA
TGAACTGGATTGAACGCCGTCCGTGTGTTCTCCGATGTCTTGGTGCCTCA
TGTAGCGGTCCATGGCTCCCTCCGAGTCGCTAGGATGAATGGGTATGGTA
GCACGAGCCGGCTCGCTGCGAGAGGAAGGGTAGGCTAGGTCAGCCGCCGT
CTCGAGCTCGTCGAGTCCATGCCGAGGAGCACTGGGATGAAGGACAGCCT
TTACGCTTACGAGGCAGAACTCCGCCAAGTAAAAAAAGCGACATCTTCTA
CGCAGAGGCGCTCTGGGCTGAGGCGAAGGGGTCAGTTGCGAACAAACGAG
GTAGTGTTAACACGATGTTTGCACAACGCGCGTTCCCTCGGGGACGTTGG
AGCCCCACGCCCTACGCTGACGGGCAGCTATGCTAGCCCTCCCAGGGCGA
CGGTGCTCCGCGCTTGGTGAAGTGACAGCCTGGTCCGGTGAGAACCCGGC
GTGCTCCGTCCCGGCTTTGTAGGGATACGAGGTCAATGGTCTAACGACTA
CGGCATGTACGACTCGAGAACACCCCCCCCCCTCCCCCGCCCCCAGTCAG
CGTTCTCCCCGTGACATGGTTGAGTTTTTCCCTCTGAACCTTGGTGATAT
AGGTCCAGCACTGCTCCAAGGAGACGCCCCTGTACCAGGTTCCCCCCTTC
GGAGGACAACGCACGGTGAGACAAGATTTCGTGACGGTGGTGGCAGTTCT
TCCCGGCCTACCTAGGTCTTCACCGACGCGAGGAAGAGAACTCGATGGAT
TTGAGTGATCGTTGTTTTTGGCCTTGGGTTAGGAAGATAACCGGAGTCAA
CTGATGGTTGTGTTCAGCCTGCCTAGGTCTCTCGCCAACACAATGAGGGA
AGACAAACCGAGGCCGATGGAGCCACGTAGCAAGTCTCTGTCGACCGTTG
GCCTGGCAATCGGGGGTGGAGTTCTTTCTCACTTTAGACGACGACGTTGG
TCTACCCTACATTCATGTACTTTTGTGATGCCGATATCCCCCCTTATTCA
TATCTGCCGGTTCCATTGCCTCAGGTACTCCAAAGCTACGTAGTGTGTCC
CGCGTGTTGTCTGCTTGCCTCGCTGTCGCTGAAACGAAGCTCACTGAAAA
TCTTTGGTTTTGGTGTGGAACCGCCCACCATCGCTCCTCGCCTTTTTTGT
AAAGAAGGCTTTGTTTCGAAATTCTTTCTGAATTTCTCCTGTGCGTATAT
ATCATCTTGGCGGTGGTGGTGTGTCGTAATCATCGCTTAATTAGTCGAAA
CTCTTCTCTTGTTTTTTTTTAGTCCAGATTATATCTGTATGAAACGTTGA
CGTTTTTGTTTTTTTTGCCCACCACAAGTCACTGCGGCAAAGAGAGAACC
ATCTTTGAAGGTTGTTTCTGTAATACTTTTGTTTGTGTTTTCTTTGACTG
CCAACCATGTTGGTCCAATCTGTCCTCTGCCTTGGCCATGCAGGTGAGGG
GGTTCGCAGAGGGGGAACTGGGTCGGGCCAAGGAGTACGCCACCAGCACG
GCCGAAGTCAGGGTTCCTCTGCGGCACCTCTTCGGAACCCTCCCGACACA
GGTGTGGAGGGGAAGGGTGGATGAAAGGACCAAGAGCGACTTGCTGTTCG
TGGCGGTGGTGTTGGTGGTGTCAAGAGCGAGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTCTTGGTGGTGGTGGTGTCA
GGAATGAAATTGTTGTTGGTGTCGTGGTGGCGTTGCTATTGCTGCGGTTG
TTGTCTTTGTTGTTCTGGGGCCTGTCCTAGCCACAACTGTACGTGAAACA
ACTGCTCGAGCTCGGCCTTGCTCGGGATGCGTAGACCGACCGCTGAGTGC
TCCCCTCCCGCCCCCCGCCCCCCCCCGTCCCCTACGGCAACGCCACCGCC
CCGACACGATTCGGCGCCAAATCACCGGCAAACGTCCATTGATTCTGGCC
GTTAACCTTGACGGCCGTATTCCCGCCGAAAAACAACAGGCGGTGCTTTT
CTTGGACCTCGCCGCGTTTCGATCTGTCACTTGGCCGCGAGGGGCCGCCT
GCTGCTGCTGCTGCTGCTGTTGCCGGCAACCCGCAGCAGCGGCGGCGGCA
CCACGGGTGGGAGACCGCGCGAGGCGCTCACGAGGGGGGGTTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8713:506..6198-

>mRNA_Ecto-sp13_S_contig8713.20179.1 ID=mRNA_Ecto-sp13_S_contig8713.20179.1|Name=mRNA_Ecto-sp13_S_contig8713.20179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8713:506..6198- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATATCCTTCGAGGAGAAGAACGTGCTTGGTCGAAACGGCGTGATGGG
GTTGAAACTCCACCGCTCCATGTCGTCTCCCTTCACTAGCTTCAGCGTTC
GCATGGGCAACAACCGCTTCGGGCAGCCGGGGGGCTGGCAGCTCTCCTTT
TTCCGTGACTGCCTCGCCCCATACAGCGGCTTCGCCCGCGGTGGCGGCGG
TGGCGGCGGCTACGCCAACAACGCTCTAGGCCCAGCATCGTCGGCCCCCG
ATTTTTCCACCGCGTCTCCGGCTGGAGTTCCAAGGGATCTGAGCATGCTG
GCTCGGTCCATTCAAGGGGCGCAGCACGGGAGGGGCGTAGCCGAGGGCGT
AGAGGAGGCCTCGGGCGGCGGGAACTCCACAAGCAAGGGGCAAGGGGCGG
GGGCGGCGGCGTCGGGAGGCGGTCTGTCCAGCTCCCACGGGGTGTCGCTG
TCCTCTTCTTGGCCTTTCGCCATCGCGAAGGTCACCGCGGCGGCGGGGTA
CCAGCAGATATCTCCGCCTACCAACGTCCTCAGAAAGCACAGCTCCCACC
ACGACGACACGCTTCCTCCTCCCGTAGGCGGCGCCGCCGACCGAATCGGC
GACGGCTCCTCCGTTGGCGGCGTTGCGGAAACCCGTCGGGGTTTGTGGGA
TGACAGCGGGGCCATGGACCTCTTGACACTGTCCGGGGGGGTTTCGAGAG
ACTGGAGACTCCCGGGCGTGCTGCGCCGGCTCGGGGGCAAGGGGCCCTCG
GCGGGGGCGGCGGCAGCGGCACCCGCGGGGTCGGTGTCGTCCTTCTTGGA
CGTGAAGACGGGGTGCCTGCTGGAGGGAGGGGCGGCGCCGCGGCCGTTCT
CGCACGAGTCGGCCACCTTGGTGCACCGGGTGCCTGTTGGACCCCACGGA
AAAGGAGGGTCCTGGAACGTCACCCTCAACGTTAGGCACCAGGTCCAGCA
CTGCTCCAAGGAGACGCCCCTGTACCAGGTTCCCCCCTTCGGAGGACAAC
GCACGGTGAGGGGGTTCGCAGAGGGGGAACTGGGTCGGGCCAAGGAGTAC
GCCACCAGCACGGCCGAAGTCAGGGTTCCTCTGCGGCACCTCTTCGGAAC
CCTCCCGACACAGGCGGTGCTTTTCTTGGACCTCGCCGCGTTTCGATCTG
TCACTTGGCCGCGAGGGGCCGCCTGCTGCTGCTGCTGCTGCTGTTGCCGG
CAACCCGCAGCAGCGGCGGCGGCACCACGGGTGGGAGACCGCGCGAGGCG
CTCACGAGGGGGGGTT
back to top