prot_Ecto-sp13_S_contig870.20164.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig870.20164.1
Unique Nameprot_Ecto-sp13_S_contig870.20164.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
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BLAST of mRNA_Ecto-sp13_S_contig870.20164.1 vs. uniprot
Match: D7FKM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKM6_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 6.150e-73
Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 0 
Query:    1 MKLLCAALWTSVVAGVPHFASCFVAGPRLAPRLSVAVNAFLKYRAESSAFSTTS-RRMRRPRVLTATAQGPGMDIDAEGFGKEIRVDIKGGIQGIPKESWDGLLRPDDSPFLEHDWLYAMEKSKCATVDTG 130
            MKLLCA LWT+VVAG P FASCFVAGPRLAPR+SVAVNA LK RAE+SAFSTTS RRMRR RVLTATAQGPGMDIDAEG GKEIRVDIKGGIQGIPKESWDGLLRPD+SPFLEHDWLYAMEKSKCATVDTG
Sbjct:    1 MKLLCAVLWTAVVAGTPDFASCFVAGPRLAPRVSVAVNALLKCRAENSAFSTTSSRRMRRRRVLTATAQGPGMDIDAEGSGKEIRVDIKGGIQGIPKESWDGLLRPDESPFLEHDWLYAMEKSKCATVDTG 131
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BLAST of mRNA_Ecto-sp13_S_contig870.20164.1 vs. uniprot
Match: A0A7C3RRD0_9BACT (GNAT family N-acetyltransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C3RRD0_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 1.840e-6
Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:   77 EGFGKEIRVDIKGGIQGIPKESWDGLLRPDDSPFLEHDWLYAMEKSKCATVDTG 130
            +G    + + +  GI  I +E W+ L+  DDSPF+E DWL+AME+S  AT  TG
Sbjct:   35 DGSAHAVELAVVEGISKIGREEWNSLVTDDDSPFIEWDWLFAMEESASATRKTG 88
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BLAST of mRNA_Ecto-sp13_S_contig870.20164.1 vs. uniprot
Match: A0A6L7SUE0_9GAMM (N-acetyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7SUE0_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 8.400e-6
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:   70 PGMDID-AEGFGKEIRVDIKGGIQGIPKESWDGLLRPDDSPFLEHDWLYAMEKSKCATVDTG 130
            PGM    AE   +++ V I  GI  IP E+WDG+LR +D PFL+H +L AME+  C   + G
Sbjct:   10 PGMSKQTAEHEAQKLTVQIHHGIDEIPSEAWDGMLR-NDYPFLKHRYLVAMERHHCVGKEVG 70
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BLAST of mRNA_Ecto-sp13_S_contig870.20164.1 vs. uniprot
Match: A0A0K1Q9M3_9DELT (Uncharacterized protein n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1Q9M3_9DELT)

HSP 1 Score: 53.5 bits (127), Expect = 2.070e-5
Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:   91 IQGIPKESWDGLLRPDDSPFLEHDWLYAMEKSKCATVDTG 130
            I  IP+E+WD +LRP  SPF+EH WL  +E++ C    TG
Sbjct:   10 IDEIPRETWDSMLRPGASPFMEHTWLSCLEEAGCVGGSTG 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig870.20164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKM6_ECTSI6.150e-7390.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7C3RRD0_9BACT1.840e-644.44GNAT family N-acetyltransferase n=1 Tax=bacterium ... [more]
A0A6L7SUE0_9GAMM8.400e-645.16N-acetyltransferase n=1 Tax=Gammaproteobacteria ba... [more]
A0A0K1Q9M3_9DELT2.070e-550.00Uncharacterized protein n=1 Tax=Labilithrix luteol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007434Peptidogalycan biosysnthesis/recognitionPFAMPF04339FemAB_likecoord: 91..130
e-value: 8.0E-8
score: 31.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..154
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.704

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig870contigEcto-sp13_S_contig870:7794..9426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig870.20164.1mRNA_Ecto-sp13_S_contig870.20164.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig870 7794..9857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig870.20164.1 ID=prot_Ecto-sp13_S_contig870.20164.1|Name=mRNA_Ecto-sp13_S_contig870.20164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
MKLLCAALWTSVVAGVPHFASCFVAGPRLAPRLSVAVNAFLKYRAESSAF
STTSRRMRRPRVLTATAQGPGMDIDAEGFGKEIRVDIKGGIQGIPKESWD
GLLRPDDSPFLEHDWLYAMEKSKCATVDTGAWGCLGWGNILPLAEFLRWS
SSLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007434FemAB-like