prot_Ecto-sp13_S_contig87.20162.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig87.20162.1
Unique Nameprot_Ecto-sp13_S_contig87.20162.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig87.20162.1 vs. uniprot
Match: D7FVE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE9_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.710e-14
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 0 
Query:    1 MASKSVERDRTAIGVKVKYLIFDWTKACEAKRGKATRVSAKNMKEATRLQCDRWIAQGALEDTLDEGPPR------THEKPGNNGGSHVQPTQKLCTWEQE 95
            MA+K V+RD TA G  V Y I DW K  E KR K  +V+AKN++EATRLQ +RWI QGAL     +  PR      + E    N G+ V+PT+   + E+E
Sbjct:    1 MAAKQVKRDFTADGPSV-YFISDWKKDSEPKRSKRKKVAAKNLQEATRLQVERWIDQGALRQNFAKESPRPVGVGKSRETTSANMGTQVEPTELQRSSEEE 100
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87.20162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVE9_ECTSI2.710e-1445.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig87contigEcto-sp13_S_contig87:34438..35823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig87.20162.1mRNA_Ecto-sp13_S_contig87.20162.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig87 34434..35823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig87.20162.1 ID=prot_Ecto-sp13_S_contig87.20162.1|Name=mRNA_Ecto-sp13_S_contig87.20162.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
MASKSVERDRTAIGVKVKYLIFDWTKACEAKRGKATRVSAKNMKEATRLQ
CDRWIAQGALEDTLDEGPPRTHEKPGNNGGSHVQPTQKLCTWEQELRPR
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