prot_Ecto-sp13_S_contig8697.20158.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8697.20158.1
Unique Name	prot_Ecto-sp13_S_contig8697.20158.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	200

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: D8LF39_ECTSI (Putative Translation Initiation Inhibitor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF39_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 1.040e-79
Identity = 127/135 (94.07%), Postives = 130/135 (96.30%), Query Frame = 0

Query:   65 APAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEMVS 199
            A  GNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLE+EQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGF GQSAVLNGASDL +EVFGREKGAHARSAVGVNALPLGVCVEIEAI E+VS
Sbjct:   66 AARGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEIEQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGFTGQSAVLNGASDLLLEVFGREKGAHARSAVGVNALPLGVCVEIEAIAEVVS 200

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.780e-48
Identity = 87/150 (58.00%), Postives = 114/150 (76.00%), Query Frame = 0

Query:   50 VEERLKQLDITLPEV-APAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            +E RL QL I LP+V AP GNY L  R+G+ L+++GH+P    G L TGKVG+D  +E+G EAA+++AINL+ T+K+  GDLDK+ R+VK+ GFV   DGF+ Q  V+NGASD F++VFG +KG HARSAVG NALPL + VEIEAIVE+
Sbjct:    4 IEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFG-DKGVHARSAVGTNALPLNIPVEIEAIVEV 152

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A3R7HFK6_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HFK6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.580e-47
Identity = 88/150 (58.67%), Postives = 110/150 (73.33%), Query Frame = 0

Query:   50 VEERLKQLDITLPEVA-PAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            +E +L++L   LPEVA P GNY    RSG+T+YM+GHLP+   G L TGKVG DL  E+  +AA  V+++++ T+K   GDLDKI R+VK+ GFV   DGFAGQ AV+NGASD F +VFG  KG HARSAVG NALPL V VEIEA+VE+
Sbjct:   22 IERKLEELGYVLPEVASPKGNYRTSVRSGNTIYMAGHLPQPAGGELITGKVGKDLTPEEAYDAAHYVSLSIMATLKQEVGDLDKIKRVVKLVGFVNCVDGFAGQPAVINGASDTFGKVFGN-KGVHARSAVGTNALPLNVAVEIEAVVEI 170

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A7S3M7I1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7I1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 5.670e-47
Identity = 84/151 (55.63%), Postives = 111/151 (73.51%), Query Frame = 0

Query:   50 VEERLKQLDITLPEVAPA--GNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKIR-LVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            +E R+  L   LP   PA  GNY+ + + G+T+Y +GHLP+  DGTL  G++G ++ VEQG +AAR+ A+N++ T+K+A GDLDK++ +VKITGFV SA  F  Q AVLNG SDL  E+FG E G HARSA+GVN LPLGV VEIEAI+E+
Sbjct:   35 IEARIASLGYKLPNEPPAPKGNYMGYTKRGNTIYTAGHLPQKHDGTLVLGRLGENVTVEQGQDAARVAALNILATVKSAVGDLDKVKKIVKITGFVNSASDFTNQPAVLNGCSDLLGEIFGVEIGRHARSALGVNVLPLGVAVEIEAIIEV 185

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 8.900e-46
Identity = 89/148 (60.14%), Postives = 109/148 (73.65%), Query Frame = 0

Query:   51 EERLKQLDITLPEV-APAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVE 196
            E +LK+L I LP   AP GN+V+  R+G+ LY SGHLP + +G  TTGKVG +L  E+  EAAR VAI LI ++K   GDLD++ R+VK+ GFV   DGFAGQ  V+NGASDLF EVFG E+G H+RSAVG NALP+ V VEIEAIVE
Sbjct:   22 EAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFG-ERGVHSRSAVGTNALPMNVPVEIEAIVE 168

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.810e-45
Identity = 85/149 (57.05%), Postives = 107/149 (71.81%), Query Frame = 0

Query:   50 VEERLKQLDITLPE-VAPAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVE 196
            +E RL Q  I L + V P GNYV   RSG+TL+++GH+P  PD  L  GKVG D+  EQ    AR VAIN+++T+K   GDLD++ R+VK+ GFV   D F GQ  V+NGASDLF+EVFG+ KG HARSAVG NALPLG+ VEIEA++E
Sbjct:   23 IEARLAQRGIQLSDPVPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGK-KGVHARSAVGTNALPLGIPVEIEAVIE 170

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: M4BMK3_HYAAE (YjgF_endoribonc domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMK3_HYAAE)

HSP 1 Score: 158 bits (400), Expect = 2.050e-45
Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 0

Query:   50 VEERLKQLDITLPEVA-PAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            VE +L++L  TLP VA P GNY    RSG+T+Y++GHLP+   G L  GK+G DL +EQG +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGF+ Q AV+NGASD   +VFG +KG HARSAVG NALPL V VEIEA+VE+
Sbjct:   22 VERKLEELGYTLPAVAEPKGNYRTSVRSGNTIYLAGHLPQPAGGDLIVGKIGKDLTLEQGYDAAHYVALSLMATLKNEVGDLDKIKRIVKLVGFVNCVDGFSQQPAVINGASDTIGKVFG-DKGIHARSAVGTNALPLNVAVEIEAVVEV 170

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A6A3U578_9STRA (YjgF_endoribonc domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U578_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.130e-45
Identity = 87/150 (58.00%), Postives = 108/150 (72.00%), Query Frame = 0

Query:   50 VEERLKQLDITLPEVA-PAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            +E +L+QL  TLP VA P GNY    RSG+T+Y++GHLP+   G L  GK+G DL  EQG +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGF  Q AV+NGASD   +VFG +KG HARSAVG NALPL V VEIEA+VE+
Sbjct:   19 IERKLEQLGYTLPAVADPKGNYRTSVRSGNTIYLAGHLPQPAGGELILGKIGQDLTPEQGYDAAHYVALSLMATLKHEVGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFG-DKGIHARSAVGTNALPLNVAVEIEAVVEI 167

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: H3HDE8_PHYRM (YjgF_endoribonc domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=H3HDE8_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 2.270e-45
Identity = 88/150 (58.67%), Postives = 108/150 (72.00%), Query Frame = 0

Query:   50 VEERLKQLDITLPEVA-PAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            +E +L++L  TLP VA P GNY    RSG+TLY++GHLP+   G L  GKVG DL  EQG +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGF  Q AV+NGASD   +VFG +KG HARSAVG NALPL V VEIEA+VE+
Sbjct:   21 IERKLEELGYTLPAVADPKGNYRTSVRSGNTLYLAGHLPQPAGGDLILGKVGKDLTPEQGYDAAHYVALSLMATLKHEVGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFG-DKGLHARSAVGTNALPLNVAVEIEAVVEI 169

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BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.150e-45
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = 0

Query:   50 VEERLKQLDITLPEVA-PAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVGSDLEVEQGAEAARLVAINLITTMKAAAGDLDKI-RLVKITGFVRSADGFAGQSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEM 197
            +E +L++L  TLP VA P GNY    RSG+T+Y++GHLP+   G + TGKVG DL  E+G +AA  VA++L+ T+K   GDLDKI R+VK+ GFV   DGF  Q AV+NGASD   +VFG +KG HARSAVG NALPL V VEIEAIVE+
Sbjct:   55 IERKLEELGYTLPAVATPKGNYRTAVRSGNTIYLAGHLPQPAGGDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQEVGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFG-DKGIHARSAVGTNALPLNVAVEIEAIVEV 203

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8697.20158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LF39_ECTSI	1.040e-79	94.07	Putative Translation Initiation Inhibitor n=1 Tax=...	[more]
A0A4D9CNR0_9STRA	1.780e-48	58.00	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A3R7HFK6_9STRA	3.580e-47	58.67	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A7S3M7I1_9STRA	5.670e-47	55.63	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A6H5KXY4_9PHAE	8.900e-46	60.14	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A835Z1E3_9STRA	1.810e-45	57.05	Putative translation initiation inhibitor n=1 Tax=...	[more]
M4BMK3_HYAAE	2.050e-45	58.00	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A6A3U578_9STRA	2.130e-45	58.00	YjgF_endoribonc domain-containing protein n=4 Tax=...	[more]
H3HDE8_PHYRM	2.270e-45	58.67	YjgF_endoribonc domain-containing protein n=9 Tax=...	[more]
A0A662WS90_9STRA	3.150e-45	58.00	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 46..197 e-value: 2.0E-58 score: 198.1
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 50..196
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 51..192 e-value: 2.4E-24 score: 86.2
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 41..197
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..199
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8697	contig	Ecto-sp13_S_contig8697:309..2930 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8697.20158.1	mRNA_Ecto-sp13_S_contig8697.20158.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8697 48..4136 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8697.20158.1 ID=prot_Ecto-sp13_S_contig8697.20158.1|Name=mRNA_Ecto-sp13_S_contig8697.20158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MRTIPSALSFFLLPSSDNVSPASPRLSPSCASSPTGRPASSRTTMATGAV
EERLKQLDITLPEVAPAGNYVLHRRSGDTLYMSGHLPKAPDGTLTTGKVG
SDLEVEQGAEAARLVAINLITTMKAAAGDLDKIRLVKITGFVRSADGFAG
QSAVLNGASDLFMEVFGREKGAHARSAVGVNALPLGVCVEIEAIVEMVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like