prot_Ecto-sp13_S_contig863.20070.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig863.20070.1
Unique Nameprot_Ecto-sp13_S_contig863.20070.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig863.20070.1 vs. uniprot
Match: D7FLW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW9_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 4.470e-12
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 0 
Query:    1 MSSSRFQVEHCDVNVAMKAGESEISEDTEEHNTSPTVETTPEVGTTRQEVDSSGSVGG 58
            MSSS  QVEH DVNVA+KA ESE+SED EEH+TSPTV+ TPEVGTT Q+  S  + GG
Sbjct:    1 MSSSGSQVEHYDVNVAIKADESELSEDEEEHSTSPTVKATPEVGTTHQQRRSEHTHGG 58
[Close]
BLAST of mRNA_Ecto-sp13_S_contig863.20070.1 vs. uniprot
Match: D7FLW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW7_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 6.470e-10
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:    1 MSSSRFQVEHCDVNVAMKAGESEISEDTEEHNTSPTVETTPEVGTTRQE 49
            MSSS  QVE C+VNVA+KAGESE SED EEHNTSP +E T E G T QE
Sbjct:   15 MSSSGSQVEQCEVNVAIKAGESESSEDEEEHNTSPVMEPTQEAGNTHQE 63
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig863.20070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLW9_ECTSI4.470e-1268.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLW7_ECTSI6.470e-1071.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig863contigEcto-sp13_S_contig863:13903..20864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig863.20070.1mRNA_Ecto-sp13_S_contig863.20070.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig863 13903..20867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig863.20070.1 ID=prot_Ecto-sp13_S_contig863.20070.1|Name=mRNA_Ecto-sp13_S_contig863.20070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MSSSRFQVEHCDVNVAMKAGESEISEDTEEHNTSPTVETTPEVGTTRQEV
DSSGSVGGCLDQPGARPKSRRHHDTTGKDPGEREHEEEEEEEEEEEEEEE
EEKEGEEGEEGEEEEELEDKAYRGKRKLGGGGRAPRWQSVRTAGRAQPNY
AESPTREPSKRQRKASESGTGERGGGGAAVQYRRR*
back to top