prot_Ecto-sp13_S_contig8620.20055.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8620.20055.1
Unique Nameprot_Ecto-sp13_S_contig8620.20055.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8620.20055.1 vs. uniprot
Match: D7FYY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYY2_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 1.780e-128
Identity = 197/210 (93.81%), Postives = 205/210 (97.62%), Query Frame = 0 
Query:    1 MMMMMGAMRGVRRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFASLLNKATGMDRGAGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNIIDAFLETIKDDQFISQFAEPGVVGELAQNSGLSALLGEDGMASVERDDLLALMALEDSPILYKTKFYEIVDKFIGKMVAFRMDVADPVKLRRLVLETLQAAGLDQPTIAQVLEV 210
            MMMMMGAMRG+RRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFASLLNKATGMDRG GAGGGIGDEVGSILAQVADMDLSQLSLSELGTN+ID FLETIKD+QFISQFAEPGV+GELAQNSGLSALLGEDGMASVERDDLLAL+ALEDSPILYKTKFYEIVDKFIGK VAFRMDVA+PVKLRRLVLETLQAAGLDQP I Q++EV
Sbjct:    1 MMMMMGAMRGMRRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFASLLNKATGMDRGDGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNVIDMFLETIKDEQFISQFAEPGVLGELAQNSGLSALLGEDGMASVERDDLLALLALEDSPILYKTKFYEIVDKFIGKTVAFRMDVANPVKLRRLVLETLQAAGLDQPMITQIMEV 210
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8620.20055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYY2_ECTSI1.780e-12893.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.86
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8620contigEcto-sp13_S_contig8620:2578..6631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8620.20055.1mRNA_Ecto-sp13_S_contig8620.20055.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8620 2578..6631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8620.20055.1 ID=prot_Ecto-sp13_S_contig8620.20055.1|Name=mRNA_Ecto-sp13_S_contig8620.20055.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MMMMMGAMRGVRRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFAS
LLNKATGMDRGAGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNIIDAF
LETIKDDQFISQFAEPGVVGELAQNSGLSALLGEDGMASVERDDLLALMA
LEDSPILYKTKFYEIVDKFIGKMVAFRMDVADPVKLRRLVLETLQAAGLD
QPTIAQVLEV
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