prot_Ecto-sp13_S_contig85881.19999.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85881.19999.1
Unique Nameprot_Ecto-sp13_S_contig85881.19999.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 7.590e-14
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MKLMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGGRHPEV 49
            M  MLFIGVDSENKT+VFAQGFFSD+ + ++ WAL+HY  ICGG+ PEV
Sbjct:  155 MHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQ-PEV 202          
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 2.550e-10
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    2 KLMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGGRHPEV 49
            KL LF+GVDSENKT VFAQGFFS+E T +F +A + +++ICGG HP+V
Sbjct:   99 KLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGG-HPKV 145          
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Match: A0A015IEW1_RHIIW (MULE domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015IEW1_RHIIW)

HSP 1 Score: 48.5 bits (114), Expect = 3.880e-6
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    1 MKLMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGGRHPEV 49
            M L +F+GVD++N T +FAQ   SDE +AS+ W LE  +E   G  P +
Sbjct:    1 MALCIFVGVDNQNYTRIFAQALLSDEISASYTWVLEQLLEANNGITPTI 49          
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 2.010e-5
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    2 KLMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGG 44
            KL LF+GVDSENKT +FAQG  S+E+ +SF +A    +EI GG
Sbjct:  872 KLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGG 914          
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Match: UPI001E695B2F (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E695B2F)

HSP 1 Score: 48.9 bits (115), Expect = 2.730e-5
Identity = 20/45 (44.44%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    3 LMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGGRHP 47
            L++F GV+  N+TIVFA G  S+E   +++W LE ++E+ GG+ P
Sbjct:   50 LVIFSGVNHHNQTIVFATGLVSNETEETYVWLLEQFLEVMGGKAP 94          
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Match: U9USP2_RHIID (MULE domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9USP2_RHIID)

HSP 1 Score: 48.5 bits (114), Expect = 3.330e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    1 MKLMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGGRHPEV 49
            M L +F+GVD++N T +FAQ   SDE +AS+ W LE  +E   G  P +
Sbjct:    1 MALCIFVGVDNQNYTRIFAQALLSDEISASYTWVLEQLLEANNGITPTI 49          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85881.19999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JEJ0_9PHAE7.590e-1469.39SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FLF6_ECTSI2.550e-1064.58Putative far-red impaired response protein n=1 Tax... [more]
A0A015IEW1_RHIIW3.880e-644.90MULE domain-containing protein n=1 Tax=Rhizophagus... [more]
A0A6H5K454_9PHAE2.010e-558.14SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001E695B2F2.730e-544.44protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Trifo... [more]
U9USP2_RHIID3.330e-544.90MULE domain-containing protein n=1 Tax=Rhizophagus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 1..48
e-value: 8.4E-7
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85881contigEcto-sp13_S_contig85881:278..430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85881.19999.1mRNA_Ecto-sp13_S_contig85881.19999.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85881 272..430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85881.19999.1 ID=prot_Ecto-sp13_S_contig85881.19999.1|Name=mRNA_Ecto-sp13_S_contig85881.19999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MKLMLFIGVDSENKTIVFAQGFFSDERTASFLWALEHYVEICGGRHPEVR
C
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom