prot_Ecto-sp13_S_contig8561.19969.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8561.19969.1
Unique Nameprot_Ecto-sp13_S_contig8561.19969.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: D8LU37_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU37_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 2.860e-152
Identity = 242/256 (94.53%), Postives = 244/256 (95.31%), Query Frame = 0
Query:   14 MKEKKKEGAGGRPRGSRKNIVGSESQGLLQAAAGTGFIGFSAFQTAAKVSPTTADVEGGGTAGSTPGGKAGAGSGHGGKRRVKTAQVTGGYSAGSAGQPVLPPHYSGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPE 269
            MKEKKKEGAGGRPRGSRKNIVGSESQGLLQAAAGTGFIGFSAFQTAAK SPTTADVEGGGTAGSTP GKAGAGSGHGGKRRVK A+V GGYSAGSAGQ VLPPHYSGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAE AASPQPGPGQDSRAGTSR SSGV PASGAGA ESSAM  PATSAE+LGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLK NRRAFQPLMSSLMGPWFCSQADTAPE
Sbjct:    1 MKEKKKEGAGGRPRGSRKNIVGSESQGLLQAAAGTGFIGFSAFQTAAKASPTTADVEGGGTAGSTPAGKAGAGSGHGGKRRVKMAKVNGGYSAGSAGQ-VLPPHYSGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAELAASPQPGPGQDSRAGTSRASSGVAPASGAGAAESSAMDTPATSAEDLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKGNRRAFQPLMSSLMGPWFCSQADTAPE 255          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: A0A835ZGR8_9STRA (E3 ubiquitin-protein ligase listerin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGR8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.570e-20
Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 0
Query:  114 LPPHYSGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEV 270
            LPP Y G++S LA++ KRL+K+D TTKLKAL++L+ +C      AE   +PQ G                 P          A + P    +++ GL PHWV++Y RL+ + DRR RE+AN TL  +  ANR+A  P +  L+GPW+   AD A EV
Sbjct:   57 LPPFYDGTNSDLAMLFKRLTKKDPTTKLKALSQLQNLCSAAASAAE---APQRG----------------TPPQQEHLHHHQAFLTP----DDVIGLVPHWVYIYARLALDNDRRVRESANATLSHVAAANRKAVVPFLRQLLGPWWICMADPASEV 190          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: UPI00201F207B (E3 ubiquitin-protein ligase listerin-like n=3 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F207B)

HSP 1 Score: 90.5 bits (223), Expect = 7.810e-16
Identity = 73/245 (29.80%), Postives = 99/245 (40.41%), Query Frame = 0
Query:  107 GSAGQPVLPPHY-------SGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSY-IDATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFL 343
            GS G P   P         S  DS   +V ++LSKRD TTK+KAL E  A+C     E                                                 L G+ P W  +Y ++S + D R REA    +  ++   RR   P + S+MG W  SQ DT P V+SSA +AF+A FP AK+   +  C   +  + +D    QTP  L E    + EE   R  R+  S+  AL   L
Sbjct:   43 GSMGSPAYVPASESFDDVDSSLDSDFRMVLRKLSKRDSTTKIKALQEFAALCEEKGEEC------------------------------------------------LKGVLPFWPRIYNKMSIDVDHRVREATQQAMTTLVSRVRRNIAPYLKSVMGSWLLSQCDTYPTVASSATQAFQAAFPPAKQTDAIDYCKTDITEFLVDNLTTQTPATLSEPKTSSLEEMETRYNRVVTSSFLALRKML 239          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: UPI001EE4F711 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE4F711)

HSP 1 Score: 87.8 bits (216), Expect = 5.940e-15
Identity = 71/245 (28.98%), Postives = 98/245 (40.00%), Query Frame = 0
Query:  107 GSAGQPVLPPHY-------SGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSY-IDATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFL 343
            GS G P   P         S  DS   +V ++LSKRD TTK+KAL E   +C     E                                                 L G+ P W  +Y ++S + D R REA    +  ++   RR   P + S+MG W  SQ DT P VS+SA +AF++ FP AK+   +  C   +  + ++    QTP  L E    T EE   R  R+  S+  AL   L
Sbjct:   43 GSMGSPAYVPASESFDDVDSSLDSDFRMVLRKLSKRDSTTKIKALQEFAGLCEEKGEEC------------------------------------------------LKGVLPFWPRIYNKMSIDVDHRVREATQQAMTTLVSRVRRNIAPYLKSVMGSWLLSQCDTYPTVSTSATQAFQSAFPPAKQTDAIDYCKTDITEFLVENLTSQTPATLSEPRTSTQEEMETRYSRVVTSSFLALRKLL 239          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: A0A7J7DZ04_TRIWF (E3 ubiquitin-protein ligase listerin n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DZ04_TRIWF)

HSP 1 Score: 85.9 bits (211), Expect = 2.600e-14
Identity = 74/248 (29.84%), Postives = 114/248 (45.97%), Query Frame = 0
Query:  102 GGYSAGSAGQPVLPPHYSGS----DSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFP-EAKRASVLRRCAEGVLSYIDATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFLE 344
            GGY   S   P L    SG+    DS +AV  KRL ++D TTKLKALA L  + +               PG++           +VP                        + P W F Y+RL  + +R  R AAN T+  ++    R   P + SLMGPW+ SQ D  PEVSS+ K++ +A FP + KR   L  C   +  Y++  ++ TP+ + + S    +E  +  ++   S++ AL++ L+
Sbjct:   36 GGYIGSSRFDPSLAGSDSGTFPDVDSEVAVHLKRLGRKDATTKLKALASLSLLFKQK-------------PGKE-----------IVP------------------------ILPQWAFEYKRLLLDYNREVRRAANDTMANLVVTVGRDIAPHLKSLMGPWWFSQFDPVPEVSSAGKQSLQAAFPAQEKRLDALMYCTSEIFMYLEENLKLTPQSMSDRSAAL-DELEEMHQQAISSSLLALATLLD 234          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: UPI0003F08DD4 (E3 ubiquitin-protein ligase listerin-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08DD4)

HSP 1 Score: 84.0 bits (206), Expect = 1.080e-13
Identity = 64/223 (28.70%), Postives = 97/223 (43.50%), Query Frame = 0
Query:  122 DSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSYI-DATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFL 343
            DS   +V ++++K+DVTTKLKA+ E  ++C+                                                    +++ G  P+W  LY R   + DRR REA       +    RR+  P + S+MGPW  SQ DT    +S+AK AF + FP +K++  +  C E +L YI D   +QT   L +     AEE   +  R+  S+  AL+ FL
Sbjct:   62 DSDFRMVMRKITKKDVTTKLKAIQEFTSLCK------------------------------------------------DKDEDSVKGTLPYWRRLYSRTCMDYDRRVREALQQAHEQLALKVRRSLAPHLKSIMGPWLLSQCDTYAPAASAAKSAFNSAFPLSKQSEAILFCKEDILMYIQDNLFKQTAATLSDPKSTPAEEMETKYNRVITSSFLALNYFL 236          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: A0A401RVC0_CHIPU (E3 ubiquitin-protein ligase listerin n=2 Tax=Chiloscyllium TaxID=34767 RepID=A0A401RVC0_CHIPU)

HSP 1 Score: 83.6 bits (205), Expect = 1.460e-13
Identity = 63/237 (26.58%), Postives = 102/237 (43.04%), Query Frame = 0
Query:  122 DSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSYI-DATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFLEAVGPEANSAFSRR 357
            D+   +V +++SKRD TTKLKA+ E  AMC+                                                    EN+ G+ P+W  +Y ++S + DRR REA       ++   +R   P + S+MG W  +Q DT    +S+AK AF+  FP  K+   +  C E +++ I D  +++TPE L +      EE  ++  R+  S++ AL   L+ +    N     R
Sbjct:   62 DADFRLVLRKMSKRDATTKLKAVQEFGAMCK------------------------------------------------EKHLENIKGVLPYWSRIYCKISLDHDRRVREAVQQAFEILVLQVKRNLAPYLKSIMGHWLIAQCDTYNPAASAAKVAFQVAFPLNKQPEAVAFCKEEIMNIICDYILKETPETLSDPQSLPEEEREEKYIRIVTSSLLALKKLLDLLPENENIVLKNR 250          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: A0A0S7JND1_9TELE (E3 ubiquitin-protein ligase listerin n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JND1_9TELE)

HSP 1 Score: 80.1 bits (196), Expect = 2.360e-13
Identity = 60/223 (26.91%), Postives = 99/223 (44.39%), Query Frame = 0
Query:  122 DSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSYI-DATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFL 343
            D+   +V ++LSKRDV T+LKA+ +  AMC+                                                   AE + G+ P+W  +Y ++S + DRR REA       ++   RR+  P + SLMG W  SQ DT    +S+A +AF+A F  AK+   L  C + +L+ + D  +++T + L ++   T EE   +  R+  S++  +   L
Sbjct:   63 DADFRLVLRKLSKRDVVTRLKAVQDFGAMCQ------------------------------------------------ERDAEEVKGVLPYWPRIYCKISVDHDRRIREATQQAFEQLVLKVRRSLAPFLKSLMGHWILSQCDTYTPAASAACQAFQAAFSPAKQPEALSFCKDEILTVLQDVLLKETADTLSDSQSVTEEERETKYVRMLTSSLLGVKRLL 237          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: UPI0011C3B8BE (E3 ubiquitin-protein ligase listerin n=1 Tax=Calypte anna TaxID=9244 RepID=UPI0011C3B8BE)

HSP 1 Score: 82.8 bits (203), Expect = 2.600e-13
Identity = 65/223 (29.15%), Postives = 102/223 (45.74%), Query Frame = 0
Query:  122 DSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSYI-DATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFL 343
            D+   +V ++LSKRDVTTKLKA+ E   MC+   RE E                       VV                        G+ P+W  +Y ++S + DRR REA   +   ++   ++   P + S+MG W  SQ DT    +S+A+EAFE  FP +K+   L  C + +L+ + D  +++TP+ L +      EE   +  R+  S++ AL   L
Sbjct:   62 DADFRMVLRKLSKRDVTTKLKAMQEFGTMCK--ERETE-----------------------VVK-----------------------GVLPYWPRIYCKISLDHDRRVREATQQSFEQLILKVKKHLAPYLKSIMGYWLISQCDTYSPAASAAREAFEKAFPSSKQPEALAFCKDEILNVLQDHLLKETPDTLSDPQTVPEEEREAKYFRILTSSLLALKKLL 236          
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Match: K7GH91_PELSI (E3 ubiquitin-protein ligase listerin n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7GH91_PELSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.600e-13
Identity = 66/223 (29.60%), Postives = 102/223 (45.74%), Query Frame = 0
Query:  122 DSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAPATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQPLMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLSYI-DATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFL 343
            D+   +V ++LSKRDVTTKLKA+ E  AMC+   RE+E                               AV+               G+ P+W  +Y ++S + DRR REA       ++   ++   P + S+MG W  +Q DT    +S+AK AFE  FP +K+   L  C E VL+ + D  +++TP+ L +      EE   +  R+   ++ AL   L
Sbjct:   62 DADFRMVLRKLSKRDVTTKLKAMQEFAAMCK--ERESE-------------------------------AVK---------------GVLPYWPRIYCKISLDHDRRVREATQQAFEQLILKVKKHLAPYLKSIMGYWLVAQCDTYSPAASAAKVAFETAFPSSKQPEALAFCKEEVLNMLQDHLLKETPDTLSDPQTVPEEEREAKYFRILTCSLLALKKLL 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8561.19969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU37_ECTSI2.860e-15294.53E3 ubiquitin-protein ligase listerin n=1 Tax=Ectoc... [more]
A0A835ZGR8_9STRA1.570e-2039.49E3 ubiquitin-protein ligase listerin (Fragment) n=... [more]
UPI00201F207B7.810e-1629.80E3 ubiquitin-protein ligase listerin-like n=3 Tax=... [more]
UPI001EE4F7115.940e-1528.98LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase l... [more]
A0A7J7DZ04_TRIWF2.600e-1429.84E3 ubiquitin-protein ligase listerin n=2 Tax=Tript... [more]
UPI0003F08DD41.080e-1328.70E3 ubiquitin-protein ligase listerin-like n=1 Tax=... [more]
A0A401RVC0_CHIPU1.460e-1326.58E3 ubiquitin-protein ligase listerin n=2 Tax=Chilo... [more]
A0A0S7JND1_9TELE2.360e-1326.91E3 ubiquitin-protein ligase listerin n=2 Tax=Poeci... [more]
UPI0011C3B8BE2.600e-1329.15E3 ubiquitin-protein ligase listerin n=1 Tax=Calyp... [more]
K7GH91_PELSI2.600e-1329.60E3 ubiquitin-protein ligase listerin n=2 Tax=Pelod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039795E3 ubiquitin-protein ligase listerinPANTHERPTHR12389ZINC FINGER PROTEIN 294coord: 76..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8561contigEcto-sp13_S_contig8561:2282..6707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8561.19969.1mRNA_Ecto-sp13_S_contig8561.19969.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8561 2282..6707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8561.19969.1 ID=prot_Ecto-sp13_S_contig8561.19969.1|Name=mRNA_Ecto-sp13_S_contig8561.19969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
ECVAGLLCVLLIAMKEKKKEGAGGRPRGSRKNIVGSESQGLLQAAAGTGF
IGFSAFQTAAKVSPTTADVEGGGTAGSTPGGKAGAGSGHGGKRRVKTAQV
TGGYSAGSAGQPVLPPHYSGSDSHLAVVSKRLSKRDVTTKLKALAELRAM
CRLVTREAEPAASPQPGPGQDSRAGTSRVSSGVVPASGAGAVESSAMIAP
ATSAENLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKANRRAFQP
LMSSLMGPWFCSQADTAPEVSSSAKEAFEAVFPEAKRASVLRRCAEGVLS
YIDATVQQTPEMLEEASGCTAEEAVKRAERLCVSAIAALSSFLEAVGPEA
NSAFSRRPTEHETVAQEEDEDVGRSRQETTYFNLVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039795LTN1/Rkr1