prot_Ecto-sp13_S_contig85449.19947.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85449.19947.1
Unique Nameprot_Ecto-sp13_S_contig85449.19947.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length36
Homology
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BLAST of mRNA_Ecto-sp13_S_contig85449.19947.1 vs. uniprot
Match: D8LJX2_ECTSI (Farnesyltransferase, CAAX box, alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJX2_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 5.540e-14
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0 
Query:    1 MDVDDLQVPLRGFEDVTPIPQDDGPDPVVSIAYRHN 36
            MDVDDLQVPLRGFEDVTPIPQDD  DPVVSIAYRHN
Sbjct:    1 MDVDDLQVPLRGFEDVTPIPQDDSADPVVSIAYRHN 36
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85449.19947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJX2_ECTSI5.540e-1494.44Farnesyltransferase, CAAX box, alpha n=2 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85449contigEcto-sp13_S_contig85449:10..117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85449.19947.1mRNA_Ecto-sp13_S_contig85449.19947.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85449 10..117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85449.19947.1 ID=prot_Ecto-sp13_S_contig85449.19947.1|Name=mRNA_Ecto-sp13_S_contig85449.19947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
MDVDDLQVPLRGFEDVTPIPQDDGPDPVVSIAYRHN
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