prot_Ecto-sp13_S_contig8537.19939.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8537.19939.1
Unique Nameprot_Ecto-sp13_S_contig8537.19939.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length364
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8537.19939.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE)

HSP 1 Score: 504 bits (1297), Expect = 1.850e-164
Identity = 280/319 (87.77%), Postives = 292/319 (91.54%), Query Frame = 0 
Query:   46 GRHLRLAWVDSPPDPSQGWRGCCGGPARVRVDTALRPQDPAVMIIPGPRAAARDPVVHLRACAVPPHFVQPWATVEVVRKDGGXXXXXXXXXXXXXDGEPVTEGTEVGDARSALRPESALELLRGCVVRSGGVVHLLYAPADAACRGVRLLCRRAPEYVIPLSADSPSGTTPATGASASRRAGGSHRSRNEKTSHGRRRGTRRRSREGEDAEEKQKMGACGEGETERLGSKQAIGGTDVACSRREDLATGAIADAVGSSVSGTPGGKTSVEKEGDWAGRLSDWGAVTISSDIVVPHKALEVSYHDVSDAARTKTTCREG 364
            GRHLRLAWVDSPPDPSQGWRGC GGPARVRVDTALRPQDPAVMIIPGPRAAARDPVVHLRACAVPPHFVQPW TVE+VR DGGXXXXXXXXXXX    EPV EGTEVGDARSALRPESALELLRGCVVRSGGVVH L+APADAACRGVRLLCRRAPEYV+PLS DSP GTTP TGASASRR GGSH S NEK+SHGRRRGTRRRSREGEDA EKQK+GACGEGETERLG+KQA G T VAC+RR D ATGAIADAVG S SGTPGGKT V+KEGDWAGRLSDWGAVTISS++VVPHKALEVSYHD+S AA +KTTC EG
Sbjct:  255 GRHLRLAWVDSPPDPSQGWRGC-GGPARVRVDTALRPQDPAVMIIPGPRAAARDPVVHLRACAVPPHFVQPWTTVEIVR-DGGXXXXXXXXXXX----EPVAEGTEVGDARSALRPESALELLRGCVVRSGGVVHFLHAPADAACRGVRLLCRRAPEYVVPLSTDSPPGTTPVTGASASRRTGGSHGSGNEKSSHGRRRGTRRRSREGEDAAEKQKVGACGEGETERLGTKQATG-TYVACTRRGDSATGAIADAVGWSESGTPGGKTGVDKEGDWAGRLSDWGAVTISSEVVVPHKALEVSYHDISAAAPSKTTCGEG 566
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8537.19939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGW6_9PHAE1.850e-16487.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8537contigEcto-sp13_S_contig8537:288..1909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8537.19939.1mRNA_Ecto-sp13_S_contig8537.19939.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8537 288..1914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8537.19939.1 ID=prot_Ecto-sp13_S_contig8537.19939.1|Name=mRNA_Ecto-sp13_S_contig8537.19939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp
MACGAGTEWMPGSSRSLQAVASVDPRPDTVEDVLNVCPQQAASFGGRHLR
LAWVDSPPDPSQGWRGCCGGPARVRVDTALRPQDPAVMIIPGPRAAARDP
VVHLRACAVPPHFVQPWATVEVVRKDGGGGGGGGGSGAGGGDGEPVTEGT
EVGDARSALRPESALELLRGCVVRSGGVVHLLYAPADAACRGVRLLCRRA
PEYVIPLSADSPSGTTPATGASASRRAGGSHRSRNEKTSHGRRRGTRRRS
REGEDAEEKQKMGACGEGETERLGSKQAIGGTDVACSRREDLATGAIADA
VGSSVSGTPGGKTSVEKEGDWAGRLSDWGAVTISSDIVVPHKALEVSYHD
VSDAARTKTTCREG
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