prot_Ecto-sp13_S_contig8393.19765.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8393.19765.1
Unique Nameprot_Ecto-sp13_S_contig8393.19765.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8393.19765.1 vs. uniprot
Match: D8LN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN11_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.770e-11
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:  194 MFDMLDSERQGRVLESDLFKHLLPLLEKTGLCSPLRKEST 233
            MFDMLDSERQGRVLESDLFKH LPLLEKTGL  P RKEST
Sbjct:    1 MFDMLDSERQGRVLESDLFKHFLPLLEKTGLSGPPRKEST 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8393.19765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN11_ECTSI1.770e-1190.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8393contigEcto-sp13_S_contig8393:3..1495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8393.19765.1mRNA_Ecto-sp13_S_contig8393.19765.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8393 3..1560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8393.19765.1 ID=prot_Ecto-sp13_S_contig8393.19765.1|Name=mRNA_Ecto-sp13_S_contig8393.19765.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MGAAGSVGTSSTAPCKSTHSSGKYAAVDGEVQRAEQFETTAKVLVSKYHD
LRLSSSGGGEGATDCASLLDNGVVSLAPMPSRSSSPPPPKVRSTRLSVQR
RLDSVAEPKIDDEVCVTTAPPTAGRQNGGQGTSANTRTGLSPGIGNVANA
NNGNGVGRGARAGSSLDHFVHRDDMIGLARDLGYDVTPEQASAMFDMLDS
ERQGRVLESDLFKHLLPLLEKTGLCSPLRKEST
back to top