prot_Ecto-sp13_S_contig817.19518.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig817.19518.1
Unique Nameprot_Ecto-sp13_S_contig817.19518.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length159
Homology
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BLAST of mRNA_Ecto-sp13_S_contig817.19518.1 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 1.480e-87
Identity = 148/159 (93.08%), Postives = 149/159 (93.71%), Query Frame = 0 
Query:    1 MGEVAAAAQAARRDRRIDTIVLAKCRRKSQTMWPARLCSKREILERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQPDFTAAEAWGEEMKALVTARRVEARTLRRQRAKEEEKVGATTFKPALAIEA 159
            MGEVAAAAQAARRDRRIDTIVLAKCRRKSQTMWPARLCSKRE+LERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQPDFTAAEAWGEEMKALVTARR EARTLRRQRAKE         KPALAIEA
Sbjct:  579 MGEVAAAAQAARRDRRIDTIVLAKCRRKSQTMWPARLCSKREMLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQPDFTAAEAWGEEMKALVTARRAEARTLRRQRAKEXXXXXXXXXKPALAIEA 737
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BLAST of mRNA_Ecto-sp13_S_contig817.19518.1 vs. uniprot
Match: D7G062_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G062_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 5.590e-43
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:   43 ILERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ 108
            +LERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ
Sbjct:    1 MLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ 66
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig817.19518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKB5_9PHAE1.480e-8793.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G062_ECTSI5.590e-4398.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainPFAMPF00855PWWPcoord: 18..101
e-value: 3.4E-7
score: 30.6
NoneNo IPR availableGENE3D2.30.30.140coord: 3..131
e-value: 2.3E-6
score: 29.5
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 12..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig817contigEcto-sp13_S_contig817:19530..21044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig817.19518.1mRNA_Ecto-sp13_S_contig817.19518.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig817 19530..21047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig817.19518.1 ID=prot_Ecto-sp13_S_contig817.19518.1|Name=mRNA_Ecto-sp13_S_contig817.19518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=159bp
MGEVAAAAQAARRDRRIDTIVLAKCRRKSQTMWPARLCSKREILERMENP
DPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKA
YAGTARLQPDFTAAEAWGEEMKALVTARRVEARTLRRQRAKEEEKVGATT
FKPALAIEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom