prot_Ecto-sp13_S_contig816.19504.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig816.19504.1
Unique Nameprot_Ecto-sp13_S_contig816.19504.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
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BLAST of mRNA_Ecto-sp13_S_contig816.19504.1 vs. uniprot
Match: A0A6H5KCU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU2_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 7.990e-18
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 0 
Query:   86 SPEQFPADRELQYRCPRTGSNTNLFLKKNIREDRADYPACRNF 128
            SPEQ PADRELQY CPRTG NTNLFLK+NIR+DRADYPACRNF
Sbjct:   52 SPEQVPADRELQYLCPRTGCNTNLFLKENIRKDRADYPACRNF 94
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BLAST of mRNA_Ecto-sp13_S_contig816.19504.1 vs. uniprot
Match: D8LET1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET1_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 9.390e-12
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:   85 GSPEQFPADRELQYRCPRTGSNTNLFLKKNIREDRADY--PACRNFRPAPAR 134
            GSPEQ PADRELQ+ CP TG NTNLFLK+NI +DRADY         P PAR
Sbjct:   53 GSPEQVPADRELQHLCPGTGCNTNLFLKENIHKDRADYCTTPAGTLAPVPAR 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig816.19504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCU2_9PHAE7.990e-1888.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LET1_ECTSI9.390e-1265.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig816contigEcto-sp13_S_contig816:2823..3239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig816.19504.1mRNA_Ecto-sp13_S_contig816.19504.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig816 2823..3239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig816.19504.1 ID=prot_Ecto-sp13_S_contig816.19504.1|Name=mRNA_Ecto-sp13_S_contig816.19504.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
WLSSHLLLLHLHSHHKSRLTPPEHISPNKHVHPCLAKAAKPPAPIPTHRP
PPLDPLRRLLLLLLLPRPPPAHGAGSSASAGSSTGSPEQFPADRELQYRC
PRTGSNTNLFLKKNIREDRADYPACRNFRPAPARGPAF*
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