prot_Ecto-sp13_S_contig81470.19491.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig81470.19491.1
Unique Nameprot_Ecto-sp13_S_contig81470.19491.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig81470.19491.1 vs. uniprot
Match: D7FYZ1_ECTSI (TauD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 6.070e-33
Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 0 
Query:   14 KVDAREYMEDDGELYKALRKINRVGVVLLENAGVEEGAVLDLARRVAPVSHHTLYGDMFDVVSQ 77
            KVDAREYMEDDG LYK LRK+NRVGVVLLENAGVEEG VLDLARRVAPVSHHTLYGDMFDVVSQ
Sbjct:   90 KVDAREYMEDDGALYKTLRKVNRVGVVLLENAGVEEGTVLDLARRVAPVSHHTLYGDMFDVVSQ 153
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BLAST of mRNA_Ecto-sp13_S_contig81470.19491.1 vs. uniprot
Match: A0A6H5KBM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM7_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.090e-27
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 
Query:   14 KVDAREYMEDDGELYKALRKINRVGVVLLENAGVEEGAVLDLARRVAPVSHHTLYGDMFDVVSQ 77
            KVDAR+YMED G +Y+ LRKINRVGVVLLENAG EEG VLDLARRVAPVSHHTLYG+MFDV+SQ
Sbjct:  191 KVDARDYMEDGGAVYRTLRKINRVGVVLLENAGAEEGTVLDLARRVAPVSHHTLYGEMFDVISQ 254
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BLAST of mRNA_Ecto-sp13_S_contig81470.19491.1 vs. uniprot
Match: A0A024GIV2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIV2_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.930e-5
Identity = 23/63 (36.51%), Postives = 38/63 (60.32%), Query Frame = 0 
Query:   15 VDAREYMEDDGELYKALRKINRVGVVLLENAGVEEGAVLDLARRVAPVSHHTLYGDMFDVVSQ 77
            VD    ME D  +++ L  +   G  +++    + G V  +A+R+AP+SH  LYG++FDVVS+
Sbjct:  186 VDYTYVMESDRGVFELLHNVVEYGCCVVKETPTKAGEVKKIAKRIAPISHSFLYGEIFDVVSE 248
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81470.19491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYZ1_ECTSI6.070e-3393.75TauD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KBM7_9PHAE1.090e-2784.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024GIV2_9STRA2.930e-536.51Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042098Taurine dioxygenase TauD-like superfamilyGENE3D3.60.130.10coord: 3..83
e-value: 5.1E-13
score: 51.0
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 13..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig81470contigEcto-sp13_S_contig81470:53..304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig81470.19491.1mRNA_Ecto-sp13_S_contig81470.19491.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig81470 53..304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig81470.19491.1 ID=prot_Ecto-sp13_S_contig81470.19491.1|Name=mRNA_Ecto-sp13_S_contig81470.19491.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
HVSLIAHNVCVSHKVDAREYMEDDGELYKALRKINRVGVVLLENAGVEEG
AVLDLARRVAPVSHHTLYGDMFDVVSQVKHTPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042098TauD-like_sf