prot_Ecto-sp13_S_contig8132.19472.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8132.19472.1
Unique Nameprot_Ecto-sp13_S_contig8132.19472.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: D7G430_ECTSI (Plastid thioredoxin M n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G430_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 2.820e-59
Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLRYFLG 94
            MLEKEPGALLVDFYATWCGPCSMMS+NLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAE+LIQ+LRYFLG
Sbjct:   82 MLEKEPGALLVDFYATWCGPCSMMSDNLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAEMLIQELRYFLG 175          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: A0A6H5JZH9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH9_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.490e-54
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLRYFLG 94
            ML KEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAE+LIQQLRYFLG
Sbjct:  715 MLAKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAEMLIQQLRYFLG 808          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: UPI0016832F16 (thioredoxin n=1 Tax=Leptolyngbya sp. FACHB-711 TaxID=2692813 RepID=UPI0016832F16)

HSP 1 Score: 113 bits (282), Expect = 8.930e-30
Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLR 90
            ML      +LVDFYATWCGPC MM+  L  V  +MKD L+I K+DTDKYP L S++GV  LPTLVLFK+G+ + ++EGV+P+E LIQ+L+
Sbjct:   13 MLSGSDVPVLVDFYATWCGPCQMMANILEQVNGQMKDRLRIVKVDTDKYPALASQYGVQALPTLVLFKQGQAIDKIEGVLPSERLIQRLQ 102          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: UPI000B59C71D (thioredoxin n=1 Tax=Leptolyngbya ohadii TaxID=1962290 RepID=UPI000B59C71D)

HSP 1 Score: 112 bits (280), Expect = 1.800e-29
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLR 90
            M+      +LVDFYATWCGPC MM+  L  V  +M D LKI KIDTDKYP + S+ GV  LPTLVLFK+G+E+ R+EGV+P+E LIQ+L+
Sbjct:   13 MISGSDLPVLVDFYATWCGPCQMMASILEQVNRQMGDRLKIVKIDTDKYPTVASQHGVQALPTLVLFKQGQEIDRIEGVLPSERLIQRLQ 102          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: UPI00140C7156 (thioredoxin n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140C7156)

HSP 1 Score: 112 bits (279), Expect = 2.550e-29
Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQL 89
            +L++ P  +LVDFYATWCGPC M+S  L+ V   +KD++++ KIDTDKYP+L  KF V+ LPTLVLFK G  + R+EGV PAE +I+QL
Sbjct:   13 LLQQSPKPVLVDFYATWCGPCRMLSPILSQVQTLLKDKIQVVKIDTDKYPDLAQKFSVHALPTLVLFKAGVPVHRLEGVAPAEKIIEQL 101          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: UPI001F003FC8 (thioredoxin n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F003FC8)

HSP 1 Score: 112 bits (279), Expect = 2.550e-29
Identity = 52/93 (55.91%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLRYFL 93
            M+ +    +LVDFYATWCGPC MM++ L  V   +KD+L+I KID+DKYP L +++ ++ LPTLVLFK+GK + R+EGV+ AE LIQ+LR FL
Sbjct:   13 MINESDLPVLVDFYATWCGPCQMMAKILEQVNVLLKDQLRIVKIDSDKYPELATQYEIHALPTLVLFKQGKPVERIEGVLRAEQLIQRLRSFL 105          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: A0A8J7E5E3_9CYAN (Thioredoxin n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7E5E3_9CYAN)

HSP 1 Score: 112 bits (279), Expect = 2.620e-29
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLR 90
            +L      +LVDFYATWCGPC MM+  LA V  ++K ELKI KIDTDKYP + S++ V  LPTLVLFK GK + R+EGV+PAE L+ +LR
Sbjct:   13 LLAGAETPVLVDFYATWCGPCQMMASILATVSRRLKGELKIVKIDTDKYPQIASQYQVAALPTLVLFKAGKPIDRIEGVLPAEQLVTRLR 102          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: UPI0019F9FA10 (Thioredoxin n=1 Tax=Pleurocapsales cyanobacterium LEGE 10410 TaxID=1828828 RepID=UPI0019F9FA10)

HSP 1 Score: 110 bits (276), Expect = 7.250e-29
Identity = 52/93 (55.91%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLRYFL 93
            +L+     +LVDFYATWCGPC MMS  L  VG  ++D L++ KIDTDKYPNL SK+ V  LPTLVLFK G+   ++EGV+ A+ LIQ L  F+
Sbjct:   13 LLDNSEIPVLVDFYATWCGPCQMMSPILEQVGASLRDRLQVVKIDTDKYPNLASKYQVEALPTLVLFKNGQPAEKIEGVLQAQQLIQHLSNFV 105          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: B1WQM8_CROS5 (Thioredoxin n=4 Tax=Oscillatoriophycideae TaxID=1301283 RepID=B1WQM8_CROS5)

HSP 1 Score: 110 bits (275), Expect = 1.030e-28
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQL 89
            ML      +LVDFYATWCGPC MMS  L  VG +M++ L++ KIDTDKYP + SK+G+  LPTLVLFK+G+ + R+EG M A  LIQ L
Sbjct:   13 MLSTSTVPVLVDFYATWCGPCQMMSPILEQVGTQMRNRLQVVKIDTDKYPGIASKYGIQSLPTLVLFKKGEPVERLEGAMQASQLIQHL 101          
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Match: A0A2W7A323_9CYAN (Thioredoxin n=8 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2W7A323_9CYAN)

HSP 1 Score: 110 bits (275), Expect = 1.060e-28
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0
Query:    1 MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLRYFLG 94
            +L    G +LVDFYATWCGPC MM+  L  V  ++K +LKI KIDTDKYP + S++ +  LPTLVLFK G+ + R+EGV+PA+ L+ +L+  LG
Sbjct:   13 LLAGASGPVLVDFYATWCGPCQMMASILTTVSSQLKGQLKIVKIDTDKYPQIASQYRIAALPTLVLFKSGQPIDRIEGVLPADQLVARLQPHLG 106          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8132.19472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G430_ECTSI2.820e-5996.81Plastid thioredoxin M n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JZH9_9PHAE3.490e-5497.87Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
UPI0016832F168.930e-3057.78thioredoxin n=1 Tax=Leptolyngbya sp. FACHB-711 Tax... [more]
UPI000B59C71D1.800e-2958.89thioredoxin n=1 Tax=Leptolyngbya ohadii TaxID=1962... [more]
UPI00140C71562.550e-2957.30thioredoxin n=1 Tax=Aphanocapsa montana TaxID=3275... [more]
UPI001F003FC82.550e-2955.91thioredoxin n=1 Tax=Leptodesmis sichuanensis TaxID... [more]
A0A8J7E5E3_9CYAN2.620e-2958.89Thioredoxin n=1 Tax=Nodosilinea sp. LEGE 07088 Tax... [more]
UPI0019F9FA107.250e-2955.91Thioredoxin n=1 Tax=Pleurocapsales cyanobacterium ... [more]
B1WQM8_CROS51.030e-2857.30Thioredoxin n=4 Tax=Oscillatoriophycideae TaxID=13... [more]
A0A2W7A323_9CYAN1.060e-2853.19Thioredoxin n=8 Tax=Cyanobacteria/Melainabacteria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 57..68
score: 45.42
coord: 17..26
score: 48.0
coord: 9..17
score: 58.4
NoneNo IPR availableGENE3D3.40.30.10coord: 1..94
e-value: 8.2E-26
score: 92.1
NoneNo IPR availablePANTHERPTHR45663FAMILY NOT NAMEDcoord: 2..89
NoneNo IPR availablePANTHERPTHR45663:SF15THIOREDOXIN Y1, CHLOROPLASTIC-RELATEDcoord: 2..89
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 4..89
e-value: 1.7E-22
score: 79.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..94
score: 10.655
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 10..28
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8132contigEcto-sp13_S_contig8132:4553..6115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8132.19472.1mRNA_Ecto-sp13_S_contig8132.19472.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8132 3909..6271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8132.19472.1 ID=prot_Ecto-sp13_S_contig8132.19472.1|Name=mRNA_Ecto-sp13_S_contig8132.19472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MLEKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYP
NLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAELLIQQLRYFLGGAAAAA
TEGAAAASGDSDQGGDACTPPPPPPPPSQDACAPPPRDACPPPPQN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf