prot_Ecto-sp13_S_contig8082.19423.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8082.19423.1
Unique Nameprot_Ecto-sp13_S_contig8082.19423.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8082.19423.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 4.130e-101
Identity = 182/226 (80.53%), Postives = 188/226 (83.19%), Query Frame = 0 
Query:    1 QVEVAIRAVSVENQMHTNATNTHGKGASSLNDGSFQDSSTLLQHALPPFVSKGNGPENV---------------VATGGGRGAAAGEVSGVGSEVSLGGGEGGEGGGAEVERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPTRAASSDDNPCTSGKGGDGGGDAASRRGVGRNKPSPVGGSSARREGSSQGGDADRVSLGRLDVSV 211
            QVEVAI+AVSVENQMHT+ATNTHG+ ASSLNDGSFQDSSTLLQHAL PFVSKGN PENV               VATGG RG A GEVSGV SEVS G   GG  GGA+ ERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQP  AASSD NP TSGKGGDGGG+AASRRGVGRNKPS VGGSS RREGSS+ GDADRVS G LDVSV
Sbjct:  159 QVEVAIKAVSVENQMHTSATNTHGRRASSLNDGSFQDSSTLLQHALSPFVSKGNDPENVLAPAVASENSELGRVVATGGLRGTAGGEVSGVSSEVSSG---GGGAGGAKFERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSD-NPTTSGKGGDGGGNAASRRGVGRNKPSSVGGSSVRREGSSESGDADRVSPGGLDVSV 380
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BLAST of mRNA_Ecto-sp13_S_contig8082.19423.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 3.190e-99
Identity = 186/226 (82.30%), Postives = 188/226 (83.19%), Query Frame = 0 
Query:    1 QVEVAIRAVSVENQMHTNATNTHGKGASSLNDGSFQDSSTLLQHALPPFVSKGNGPENV---------------VATGGGRGAAAGEVSGVGSEVSLGGGEGGEGGGAEVERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPTRAASSDDNPCTSGKGGDGGGDAASRRGVGRNKPSPVGGSSARREGSSQGGDADRVSLGRLDVSV 211
            QVEVAIRAVSVE+QMHT+ATNTHGKGASSLN GSFQDSSTLLQHALPPFVSKGNGPENV               VATGGGRGAAAGEVSGVG EVSLG   GG  GGAE ERC DCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQP  AASSD NP TSG GGDGGG AASRRGVGRN PS VGGSS RREGSSQ G AD VS G LDVSV
Sbjct:  957 QVEVAIRAVSVEHQMHTSATNTHGKGASSLNGGSFQDSSTLLQHALPPFVSKGNGPENVLAPAVASENSELGGVVATGGGRGAAAGEVSGVGLEVSLG---GGGAGGAEEERCGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPSTSGTGGDGGGTAASRRGVGRNNPSSVGGSSVRREGSSQSGGADCVSPGELDVSV 1179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8082.19423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQR3_9PHAE4.130e-10180.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ9_ECTSI3.190e-9982.30WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60coord: 97..125
e-value: 4.4E-5
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8082contigEcto-sp13_S_contig8082:4555..7048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8082.19423.1mRNA_Ecto-sp13_S_contig8082.19423.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8082 4554..7048 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8082.19423.1 ID=prot_Ecto-sp13_S_contig8082.19423.1|Name=mRNA_Ecto-sp13_S_contig8082.19423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
QVEVAIRAVSVENQMHTNATNTHGKGASSLNDGSFQDSSTLLQHALPPFV
SKGNGPENVVATGGGRGAAAGEVSGVGSEVSLGGGEGGEGGGAEVERCED
CGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPTRAA
SSDDNPCTSGKGGDGGGDAASRRGVGRNKPSPVGGSSARREGSSQGGDAD
RVSLGRLDVSV
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