prot_Ecto-sp13_S_contig8043.19376.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8043.19376.1
Unique Nameprot_Ecto-sp13_S_contig8043.19376.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length116
Homology
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 6.390e-65
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0
Query:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVS 116
            MLTFHKRMSIVTDTLSRASTHL+HFLFVFFLVILAF+AL WLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGV S
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVAS 116          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: D7FTQ7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ7_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.020e-63
Identity = 108/116 (93.10%), Postives = 110/116 (94.83%), Query Frame = 0
Query:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVS 116
            MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAF+AL WLLVGSSTKEFSTL +AW SV RISLGESENFYPQILDAQPTVGPV VVLYQVLGVVLLLNVVIAI LEAYRGVVS
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLVEAWGSVTRISLGESENFYPQILDAQPTVGPVAVVLYQVLGVVLLLNVVIAIFLEAYRGVVS 116          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.300e-62
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
Query:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAY 111
            MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAF+AL WLLVGSSTKEFSTLEDAW+SV RISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLE +
Sbjct:   32 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: A0A6H5JIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW8_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.570e-30
Identity = 67/105 (63.81%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFL--------------------------VILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDA 79
            M TFHKRMSIV DTLSRASTHL  FLFVFFL                          V+LAF+AL +LLVGSSTKE STLEDAWRSVIRIS GES+N YPQILDA
Sbjct:   57 MFTFHKRMSIVPDTLSRASTHLTQFLFVFFLERLTQLPDKRCLGVLVLVVVLTTPMVVVLAFAALTFLLVGSSTKEISTLEDAWRSVIRISPGESDNLYPQILDA 161          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 8.120e-19
Identity = 47/114 (41.23%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGV 114
            ML FH R+S+VTD L+ ++ HL HF  +FF+V+  +S L W++ G S+  F+T   ++ ++ RI+LGE +N YP +++       +++V YQ L  +LLLN+VI+ILL+A++ V
Sbjct:  242 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMV 355          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: A0A8J5X0G5_DIALT (PKD_channel domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0G5_DIALT)

HSP 1 Score: 69.3 bits (168), Expect = 2.270e-11
Identity = 41/113 (36.28%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    2 LTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGV 114
            L FH++ S+VT TL RA   L HFL VF +V++ ++ + + ++G   + ++TL  A  S+  + + +    +  I+D  P VGPV    Y +L  ++L+NV++AILL+AY  V
Sbjct:  540 LAFHQQFSLVTATLLRAGASLAHFLVVFAIVLVMYAFVGFNMLGHKLERYNTLGKAINSMCSMLVFDDTVSFADIMDVAPLVGPVFYWSYFILSSLMLINVLLAILLDAYASV 652          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: A0A7S0MWE4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MWE4_9CRYP)

HSP 1 Score: 58.2 bits (139), Expect = 1.780e-7
Identity = 39/112 (34.82%), Postives = 68/112 (60.71%), Query Frame = 0
Query:    4 FHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSV----IRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAY 111
            F  R++I+  TLS A+  L HF+ +F  V +A++ +A +L G+    FSTL   +RS+    I + +G +  +Y QI    PT+  V  + + +L  V+L+N+++AIL++AY
Sbjct:  416 FQPRLAIINKTLSIAAIDLLHFVIMFVTVFVAYAVMANILFGTEINNFSTL---YRSITTLFIWVLVGGAPTYYAQITHVAPTMAFVFYLTFMLLVFVVLMNLLLAILVDAY 524          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: A0A7J7XCY7_PIPKU (Polycystin 2 like 2, transient receptor potential cation channel n=4 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7XCY7_PIPKU)

HSP 1 Score: 54.7 bits (130), Expect = 2.960e-6
Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = 0
Query:    2 LTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGV 114
            ++F+  MS ++ TLS     +  F  +FF+++LA++ L +LL GS   +FSTL ++  +  RI LG+    +  I  A P +GP+  + + +   ++LLN+ +AI++  Y  V
Sbjct:  388 ISFNNTMSQLSSTLSCCIKDIVGFTIMFFIILLAYAKLGFLLFGSQVDDFSTLRNSIFTQFRIILGDFN--FAAIQQASPILGPIYFITFILFIFLVLLNMFLAIIIFTYSEV 498          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: UPI0009E1FD1A (location of vulva defective 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1FD1A)

HSP 1 Score: 54.7 bits (130), Expect = 3.190e-6
Identity = 38/116 (32.76%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVS 116
            ++ F++ +  +  TL+RA+  L  +  VF   +LA++ LA+LL+ S+ + +S+  ++ R+V+++ LG    FY +I      +GP+ V LY    + +LLN+ +AIL E+Y  VV 
Sbjct: 2097 LIRFNRHVCQMMGTLARAARPLVSYSVVFVSAVLAYTLLAFLLLSSTMRPYSSFFNSLRAVLQMLLGGKIFFY-EIKSVNSLLGPLFVFLYMFTMMFILLNMFLAILNESYWEVVD 2211          
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Match: A0A6G0R7K6_9STRA (5'-nucleotidase n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R7K6_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.250e-6
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 0
Query:    3 TFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVS 116
            T  KRMS++   L RA+  L  F   F + I AF+ +  LL G   + FS+L  A  ++++   GE +  Y  + D+    GP+  +LY +L +++L+NV +AIL +AY   ++
Sbjct:  764 TVSKRMSLLLRMLGRAARDLAWFFVCFLVCICAFAQIGLLLFGLDVRGFSSLGSAIVTLLQAVAGELD--YAGMADSHRVAGPIFYILYYLLLLLILVNVFLAILNDAYMQTIT 875          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8043.19376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5L574_9PHAE6.390e-6596.55PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
D7FTQ7_ECTSI1.020e-6393.10Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FTQ6_ECTSI6.300e-6294.59Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JIW8_9PHAE3.570e-3063.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W7_ECTSI8.120e-1941.23Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A8J5X0G5_DIALT2.270e-1136.28PKD_channel domain-containing protein n=2 Tax=Diac... [more]
A0A7S0MWE4_9CRYP1.780e-734.82Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7J7XCY7_PIPKU2.960e-631.86Polycystin 2 like 2, transient receptor potential ... [more]
UPI0009E1FD1A3.190e-632.76location of vulva defective 1-like n=1 Tax=Orbicel... [more]
A0A6G0R7K6_9STRA4.250e-633.335'-nucleotidase n=2 Tax=Phytophthora fragariae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 2..112
e-value: 3.3E-18
score: 65.6
NoneNo IPR availableGENE3D1.10.287.70coord: 7..109
e-value: 3.6E-9
score: 38.7
NoneNo IPR availablePANTHERPTHR10877POLYCYSTIN-RELATEDcoord: 2..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 25..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8043contigEcto-sp13_S_contig8043:3..1761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8043.19376.1mRNA_Ecto-sp13_S_contig8043.19376.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8043 3..1761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8043.19376.1 ID=prot_Ecto-sp13_S_contig8043.19376.1|Name=mRNA_Ecto-sp13_S_contig8043.19376.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFSALAWLLVGSSTKE
FSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLL
NVVIAILLEAYRGVVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel