prot_Ecto-sp13_S_contig7921.19206.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7921.19206.1
Unique Nameprot_Ecto-sp13_S_contig7921.19206.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: D7FRS8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS8_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 1.820e-108
Identity = 166/190 (87.37%), Postives = 175/190 (92.11%), Query Frame = 0
Query:    1 MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTNVETVIEDTALDECRDTRASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKARRCRRSNV 190
            MSGE QQQLFSVDGSVPEGALCAIIGPTDSGKSALL LLSGRPCMGRVEGRALFEGRLI+E+Q  +   R SIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVT VETVI DTALDECRDTRASF++AGEKRRLSLA+ELLSDRRILLLDGVFSGLDTN  MVLM+VLKRLSR K  RCRRS++
Sbjct:    1 MSGEFQQQLFSVDGSVPEGALCAIIGPTDSGKSALLALLSGRPCMGRVEGRALFEGRLIEEQQMPSNTDRHSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTKVETVIGDTALDECRDTRASFLAAGEKRRLSLAVELLSDRRILLLDGVFSGLDTNESMVLMEVLKRLSRNKVTRCRRSSM 190          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: D7G376_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G376_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.130e-22
Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 0
Query:    4 ESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTNVETVIEDTALDECRDTRASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRK 180
            E +Q L ++DG VP+G+LCA++GP+ SGKS LL LL+GR  +GR  G  +F G+ I  ++ S         ++ +  +GY+  + +                             T+L+   +T+A  +S G KRRLSLALELL DRR+L LD   SGLD  + + LM +LKRLS K
Sbjct:  488 EEKQLLHNMDGEVPKGSLCALMGPSGSGKSTLLDLLTGRKAIGRCSGELMFNGKSIANQKGS---------YISK--SGYMRAIKL-----------------------------TSLEGSINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTK 624          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A2P6V3E0_9CHLO (ABC transporter G family member 22-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3E0_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 1.360e-21
Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 0
Query:    4 ESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGR-PCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLE--DQVTNVETVIEDTALDECRDTRASF-----ISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 178
            + +Q LF++ G    G + A++GP+ SGK+ LL++L GR P   R EGR LF GR + ++       +RSIGFV Q    Y A L+V   + FAAMLR P      +++  V  VI+   L+ C+DT         +S GE++R+S+  ELL +  ILLLD   SGLD++A   L+++L+ L+
Sbjct:   82 DMRQVLFNISGECEPGEMLALMGPSGSGKTTLLSILGGRTPKQTRQEGRVLFNGRPLTKRV------KRSIGFVLQDDLLY-ATLTVQETLHFAAMLRLPKRKPKAEKLERVAAVIKALGLERCKDTIIGDQLRRGVSGGERKRVSVGHELLINPAILLLDEPTSGLDSSAARKLVELLRGLA 257          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A5K1CNP9_9MAGN (ABC transporter domain-containing protein (Fragment) n=5 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CNP9_9MAGN)

HSP 1 Score: 97.1 bits (240), Expect = 4.480e-21
Identity = 67/186 (36.02%), Postives = 105/186 (56.45%), Query Frame = 0
Query:    2 SGESQQQLFS-VDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLE--DQVTNVETVIEDTALDECRDTRASF-----ISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSR 179
            +G  ++ + S + G V  G + A++GP+ SGK+ LLT L GR   G++ G+  + GR         G  +RSIGFV Q    Y   L+V   ++FAA+LR PGSL    ++ + E+V+ +  L +CRD+         IS GEK+R+S+  E+L +  +LLLD   SGLD+     ++  +K L+R
Sbjct:   31 AGRKEKTILSGISGMVYPGEILAMLGPSGSGKTTLLTALGGR-LAGKLSGKITYNGRPF------TGSIKRSIGFVAQNDVLY-PHLTVMETLVFAALLRLPGSLSLATKLEHAESVLTELGLTKCRDSIVGGALVRGISGGEKKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRILTTVKGLAR 208          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A3P3YM44_PLABS (ABC transporter domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YM44_PLABS)

HSP 1 Score: 100 bits (248), Expect = 4.590e-21
Identity = 67/183 (36.61%), Postives = 100/183 (54.64%), Query Frame = 0
Query:    4 ESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDT------RASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 178
            E +  L  V G    G LCAI+G + +GK+ LL +L+GR  +G + G  L  G    E        ++++ FV Q     L  LSV   +M+AAMLR P S+  ED+   VE +IE   L +C D+       A  IS GE++R+S+ +EL++D  +L LD   SGLD      +MDV+K+++
Sbjct:  108 EERALLKGVSGEAKPGQLCAIMGSSGAGKTTLLNVLAGRIDVGNLSGSILVNGDPRTESTW-----KKTVAFVEQDDL-MLHNLSVRETLMYAAMLRLPSSVSKEDKANRVEKIIEQLGLKKCADSWIGSVDTARGISGGERKRVSIGIELVTDPSLLFLDEPTSGLDAFTACTVMDVVKKVA 284          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A7R9V328_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V328_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 6.550e-21
Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 0
Query:    6 QQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDTRASFI-----SAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 178
            +Q LF+V G    G L A++GP+  GKS+LL +L GR    R  G   + G+ + +        +RSIGFV Q    Y   L+VF  + +AAML+ P ++  ED++   E V+E   L  CRDT    +     S GE++R+S+ +ELL++  ++LLD   SGLD+   + LM  L+ L+
Sbjct:  127 RQVLFNVSGCAEPGELMALMGPSGCGKSSLLQVLGGRTTA-RPRGAIGYNGKKLTKAM------KRSIGFVSQDDILY-GSLTVFETLYYAAMLQLPRTMRTEDKIARAEIVMETLGLSGCRDTIIGDVFMRGVSGGERKRVSIGVELLTNPSVILLDEPTSGLDSTTALKLMHTLRNLA 298          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A7R9V2E3_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V2E3_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 6.660e-21
Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 0
Query:    6 QQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDTRASFI-----SAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 178
            +Q LF+V G    G L A++GP+  GKS+LL +L GR    R  G   + G+ + +        +RSIGFV Q    Y   L+VF  + +AAML+ P ++  ED++   E V+E   L  CRDT    +     S GE++R+S+ +ELL++  ++LLD   SGLD+   + LM  L+ L+
Sbjct:  272 RQVLFNVSGCAEPGELMALMGPSGCGKSSLLQVLGGRTTA-RPRGAIGYNGKKLTKAM------KRSIGFVSQDDILY-GSLTVFETLYYAAMLQLPRTMRTEDKIARAEIVMETLGLSGCRDTIIGDVFMRGVSGGERKRVSIGVELLTNPSVILLDEPTSGLDSTTALKLMHTLRNLA 443          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: L8HBX9_ACACA (ABC2 type transporter superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HBX9_ACACA)

HSP 1 Score: 98.6 bits (244), Expect = 1.510e-20
Identity = 65/188 (34.57%), Postives = 111/188 (59.04%), Query Frame = 0
Query:    3 GESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGS--LEDQVTNVETVIEDTALDECRDTRASF-----ISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKAR 183
            G +++ L +++G    G L AI+GP+  GK+  L LL+GR   G VEG+    G+   ++       +R + +V Q  T  + +LSV +N+ ++A+LR P S  L+++   VE VIE+  L +C +T         IS G++RR+S+ +EL++D  ILLLD   SGLD+ +   ++++L +L+R + R
Sbjct:   98 GTAKKLLDNLEGFAAAGRLLAIMGPSGCGKTTFLDLLAGRVSSGVVEGQITVNGQPKSKRT------KRLMAYVMQEDT-LIGDLSVRSNLYYSALLRLPRSMPLKEKKKKVEQVIEELGLSDCANTIVGTPLRRGISGGQRRRVSIGMELITDPSILLLDEPTSGLDSKSAASVVEILLKLARDRNR 278          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A1Y2AYK9_9TREE (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2AYK9_9TREE)

HSP 1 Score: 98.6 bits (244), Expect = 1.750e-20
Identity = 62/174 (35.63%), Postives = 94/174 (54.02%), Query Frame = 0
Query:    9 LFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDTRASF-----ISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLK 175
            L SV    P G + AI+GP+ +GKS LL LL+ RP            G+L+   Q ++   R ++ FV Q    +L  L+V   + +AA+LR P  +   ++V   ETV+    L +C D          IS GEKRRLSLA+++++D  +LL+D   SGLD +  + +M VL+
Sbjct:  741 LDSVSAVFPAGEVSAILGPSGAGKSTLLQLLAHRPITASPLSHFTTSGQLLFANQPASSTSRSNVAFVEQDDDWHLPSLTVRETLRYAAILRLPNKMPRREKVARAETVLRMLGLKDCADLPVGGQLLKGISGGEKRRLSLAVQMINDPAVLLVDEPTSGLDASIALSVMQVLR 914          
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: UPI001F5E7752 (ABC transporter G family member 22 isoform X1 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5E7752)

HSP 1 Score: 97.8 bits (242), Expect = 2.840e-20
Identity = 63/191 (32.98%), Postives = 112/191 (58.64%), Query Frame = 0
Query:    1 MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDT------RASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKAR 183
            +S +S++ L +V G +  G +CAI+GP+ +GKS+LL +L+GR    R +G  L  G +    +  + F RR IG+V Q    + + L++  ++ F   +R P S+  ++++T V+ VI+D  L +C +T           S GE++R S+A+EL+++   ++LD   +GLD++    LM+ LK L+ K+ R
Sbjct:   19 VSVDSKEILKNVCGEINPGEVCAIMGPSGAGKSSLLNILAGR----RTKGVVLNNGSITINGENYSKFHRRKIGYVTQEDI-FFSNLTIRQSLEFVGKIRLPDSMKWDEKLTIVDKVIDDLGLRKCENTVLGGDFYTKGCSGGERKRCSIAVELITNPACIILDEPTTGLDSSTAFNLMNTLKNLAEKEKR 204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRS8_ECTSI1.820e-10887.37ABC transporter domain-containing protein n=1 Tax=... [more]
D7G376_ECTSI1.130e-2237.85ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2P6V3E0_9CHLO1.360e-2138.80ABC transporter G family member 22-like n=1 Tax=Mi... [more]
A0A5K1CNP9_9MAGN4.480e-2136.02ABC transporter domain-containing protein (Fragmen... [more]
A0A3P3YM44_PLABS4.590e-2136.61ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7R9V328_9CHLO6.550e-2136.67Hypothetical protein n=2 Tax=Chlamydomonas euryale... [more]
A0A7R9V2E3_9CHLO6.660e-2136.67Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
L8HBX9_ACACA1.510e-2034.57ABC2 type transporter superfamily protein n=1 Tax=... [more]
A0A1Y2AYK9_9TREE1.750e-2035.63p-loop containing nucleoside triphosphate hydrolas... [more]
UPI001F5E77522.840e-2032.98ABC transporter G family member 22 isoform X1 n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..185
e-value: 7.1E-32
score: 112.9
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 9..181
NoneNo IPR availablePANTHERPTHR19241:SF570LD11139Pcoord: 9..181
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 11..156
e-value: 4.9E-16
score: 59.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7921contigEcto-sp13_S_contig7921:1298..3378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7921.19206.1mRNA_Ecto-sp13_S_contig7921.19206.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7921 1268..3378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7921.19206.1 ID=prot_Ecto-sp13_S_contig7921.19206.1|Name=mRNA_Ecto-sp13_S_contig7921.19206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEG
RALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLR
TPGSLEDQVTNVETVIEDTALDECRDTRASFISAGEKRRLSLALELLSDR
RILLLDGVFSGLDTNACMVLMDVLKRLSRKKARRCRRSNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase